Protein

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Genbank accession
UPI12547.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSNSNYMYFVDFEKFGIRSDGTEARATTDGWIAALKEAVELGYHTVYVPEGLYLIDAVSTVGSLPEYGGGLMFPSNIEVIFHERALFEVAPNSSTGYACFNLENVENVTLRGGTIIGDRYEHDYVTDGVPDNRKTHEWGHGIHIRGCRNITVENATVMNCTGDNIWVPAKGMMNWEGSTYIPSEGITIRKCILIRGRRNNLATNGCLGMNVDDCDFIEAGGDTIGPAFGIDLEGFAENSIKYDHPYEINITNCRFKRNGKGALNINVTGKVHATNNFSDDVFSYGFSTDSTISNNTITNETGIAKPYGIDSIRKSSSETGNRTIITGNQIRGFATGICARGVGVIVSQNYLEDISSVGINPYLSEDVMVANNTVNSDCLHVWVRNSVDVQVGNNKGKGADNYYGIKVEDSSDVVVNDNKHVAKGGIQIARSTNVRIKDNDLTLTGNGNGVSWDKTSQVKIVKANWISGAAATAISGYADVYSTIISGNTLEDCKYLIAVYLNGGSHHMIRNNNIMFRRGANGGYGVQLVNTAQVRLIGNDVRTMDGGTLYASYDSIGATYTKYAYNTYIGKINLNQTDSENYSTKLD
Physico‐chemical
properties
protein length:587 AA
molecular weight: 63970,47000 Da
isoelectric point:5,39302
aromaticity:0,09029
hydropathy:-0,29915

Domains

Domains [InterPro]
IPR012334
STR
13–339
IPR012334 DC_0453
IPR011050
STR
33–394
IPR011050 IPR012334
IPR006626
Unmapped
105–146
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR039448
ENZ
289–440
IPR039448
IPR011050
STR
382–539
IPR011050
UPI12547.1
1 587
Architecture
STR
STR 13-586 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPI12547.1
1 587
Domain Start End Length (AA) Confidence
N-terminal 1 23 23 0,9384
Central domain 24 576 554 0,9981
C-terminal 577 587 10 0,2675
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-23
Central
24-576
C-terminal
577-587

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SBSphiJ4
[NCBI] 		2930341 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis BEST7003
[NCBI] 		1204342 Bacillota > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus subtilis BEST7003

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPI12547.1 [NCBI]
Genbank nucleotide accession
OM982671.1 [NCBI]
CDS location
range 20984 -> 22747
strand -
CDS
TTGTCGAACTCGAACTATATGTACTTTGTTGACTTTGAGAAATTCGGGATCAGGTCTGATGGGACAGAGGCTAGAGCAACAACTGACGGGTGGATTGCTGCACTTAAAGAGGCTGTAGAGCTTGGATACCACACAGTATACGTACCGGAAGGTCTTTACCTTATTGACGCTGTAAGCACTGTAGGAAGCCTTCCAGAGTATGGTGGAGGATTAATGTTTCCATCGAACATCGAGGTTATCTTCCACGAAAGAGCACTGTTTGAAGTGGCACCGAACAGTTCTACAGGGTACGCATGCTTCAACCTTGAGAATGTAGAAAATGTGACTCTACGAGGAGGCACGATTATCGGGGACCGCTACGAGCATGACTACGTTACAGATGGAGTACCAGATAACCGTAAGACTCATGAGTGGGGTCACGGCATCCATATCAGAGGTTGTCGTAATATCACAGTAGAGAATGCAACTGTCATGAACTGCACAGGAGACAACATCTGGGTACCTGCTAAGGGTATGATGAACTGGGAGGGCAGCACCTACATACCTTCTGAAGGGATCACTATACGTAAATGTATACTGATTCGAGGAAGACGTAATAACCTAGCCACGAACGGCTGCCTTGGCATGAATGTTGATGACTGTGATTTCATCGAAGCTGGCGGAGACACTATCGGACCTGCATTCGGTATCGACTTAGAGGGATTCGCTGAAAACAGCATTAAGTACGACCATCCTTATGAAATCAACATCACGAACTGTCGCTTCAAAAGAAATGGTAAAGGTGCCTTAAACATCAACGTTACAGGGAAAGTTCATGCTACTAATAACTTCTCCGATGACGTGTTCAGCTATGGGTTCTCAACAGATAGCACAATCAGTAACAATACGATTACCAATGAGACGGGAATCGCTAAGCCTTACGGTATAGACTCCATCCGTAAGTCCTCATCCGAAACAGGTAACCGTACGATCATTACAGGTAACCAGATCAGAGGGTTTGCTACAGGAATTTGTGCCCGAGGTGTTGGTGTCATCGTTAGCCAAAACTACCTTGAGGATATAAGTTCTGTCGGGATCAACCCTTACCTTTCTGAAGACGTTATGGTAGCTAACAACACGGTTAACAGTGACTGCTTACATGTCTGGGTCCGTAACTCTGTAGATGTTCAGGTAGGTAATAACAAGGGTAAAGGTGCTGACAATTACTACGGAATCAAGGTAGAGGACTCCAGCGATGTAGTTGTCAATGATAACAAACATGTAGCCAAGGGCGGAATCCAGATTGCCCGGTCAACAAATGTACGTATTAAAGACAATGATCTAACTCTTACTGGAAACGGAAATGGTGTTAGCTGGGACAAGACTTCCCAAGTAAAAATAGTTAAGGCTAACTGGATTAGTGGCGCCGCAGCAACTGCTATTTCAGGATACGCAGACGTATACTCCACTATTATCTCAGGAAATACCTTAGAAGATTGTAAATATCTGATCGCTGTTTACTTGAATGGCGGCTCTCACCACATGATTAGAAATAACAACATTATGTTCAGAAGAGGAGCCAACGGAGGTTACGGGGTCCAGCTAGTAAACACCGCACAGGTTAGATTAATTGGTAATGATGTCCGTACGATGGACGGAGGCACTCTATATGCTTCATATGACTCTATAGGGGCAACTTACACAAAATATGCGTACAACACGTATATCGGTAAGATCAACCTTAACCAAACAGACTCTGAAAACTATAGCACAAAATTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aa2941545d386b056246c5676747eff5a9ae36c8ef972517fa06dcdcf4a36e29
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8689
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50