Protein

View in Explore
Genbank accession
YP_009055302.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTIVYDVTGHKGGGGKQHTPQETPDSLHSLAKIRILLALGEGEFEGIPDPNELRRRVYLDGTPIQNADLSENFPGARVEFRPGTQHQDVIHGFSAVESEQSVGVKLENGTPWVRQINDTSLDAVRIRIGIPALYTNEDNGDLVGGRIDYKIVVYTDNADPREFRFAAVGKTMSLYERDHRIELPSNVNTGWRVEVHRTTADSTSAKVVNDIQVQSITEIIDARLRYPLTALLFVEFDAKAFQNIPRVSIKCKGRKVLIPNNYDPINHTYSGDWDGTFKRAWTDNPAWHWYDICITERFGLGRRIKPQMLNRYALYQIAQRCDQLVSDGNGGREIRFKNDMYIQSQTDAWTVLKDLAAIFAGMTWWGNQMLNIVSDQPVAAVSHTITNASVIDGRFDYASGSQKTRYSTFAVAYGNPKNHYDDAIATGQRVELVRRHKINRLDITAIGCTRESEAQRRGHWALISNQLDQQVSFKVGMEGLFFIPGSVVAIADTNISGGFETRGGRLLSDPGTRTVLNTDSEITFRPGDKFLVRTDSGNVESREIASVNGNKVTLKTALDADPIPDQPFCVDGNDIQLQKFRITDLEYDDSTSTFSVRGIEYNDSKYDAVDNGARLDPGIFTQVPDGVMKGPESVTITPSQISSQGQLITNVDIVFPPVKDAVVYEIQWRRTSLQNMAVQWGNDWVNIPRTASNGAHIPNVFSGNYQARVRAIGMGEISSPWVSSAITPIEGRLGGLNAPIITNAISGLHQILWKWNHNNAATDISYTELEVRKLGETEWKFLTNVPYPGSDYAQTSLEFGIYQQLRARVADKIGNLSDWSAPFEGQVSDKVDEYMKGLDDAFLTSEDGKHFQEAIDTIPQGIYESMLTDAQQLFNARAEYQGIYAEIKVAYNVAADAHKAVAQLETLIGTRLDDAEAAIHTLQTAQSTHEQAFAQYQQTVAAKFGEQEAAIDQVQTATADVAGALAEYKTQVAAQFGQQSAAIEQKMTSSFNHAGGSATYSLKAGVTYNGTYYDAGMQLSVVAEGGAVKSRIAFKADQFYIMHPSNGSLSSAFIVDGGQVYIDTARIKNASINFAQITDTLQSNNWNPGSSGWRIAKDGGAEFNNVTVRGNLYATTGNFGFSGGSVTIDSTGVNVPLPGGGRVKVGTW
Physico‐chemical
properties
protein length:1148 AA
molecular weight: 126344,39480 Da
isoelectric point:5,37205
aromaticity:0,09146
hydropathy:-0,36141

Domains

Domains [InterPro]
DC_0014
STR
1–1148
DC_0014
IPR053171
Unmapped
7–857
IPR053171 IPR015406
IPR055385
ATT
96–222
IPR055385 IPR032876
YP_009055302.1
1 1148
Architecture
STR
ATT
STR
ATT
STR
STR 1-95 | ATT 96-222 | STR 223-343 | ATT 344-495 | STR 496-1148
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009055302.1
1 1148
Domain Start End Length (AA) Confidence
N-terminal 1 514 514 0,9199
Central domain 515 1080 567 0,0332
C-terminal 1081 1148 67 0,8081
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-514
Central
515-1080
C-terminal
1081-1148

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EK99P-1
[NCBI] 		1527514 Uroviricota > Caudoviricetes > Dhillonvirus >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009055302.1 [NCBI]
Genbank nucleotide accession
NC_024783 [NCBI]
CDS location
range 17436 -> 20882
strand +
CDS
ATGACGATTGTCTATGACGTCACAGGCCATAAAGGCGGCGGTGGCAAACAGCACACCCCACAGGAGACACCCGATAGCCTGCATTCGCTGGCTAAAATCCGCATCTTGCTTGCGCTGGGAGAAGGTGAGTTCGAAGGTATTCCAGACCCTAACGAATTACGGCGGCGCGTATATCTGGACGGAACACCGATCCAGAATGCAGACCTGTCTGAAAACTTCCCAGGCGCGCGTGTGGAGTTCCGCCCCGGAACACAGCACCAGGATGTGATCCACGGATTTTCAGCGGTGGAAAGTGAGCAATCTGTCGGCGTAAAACTGGAAAACGGCACGCCGTGGGTGCGCCAGATTAACGACACCAGTTTGGACGCCGTGCGCATTCGCATCGGCATTCCGGCCCTGTACACAAACGAAGATAATGGCGACCTGGTGGGCGGGCGCATCGACTATAAGATCGTTGTGTATACGGATAACGCGGACCCGCGTGAGTTCAGATTCGCCGCCGTTGGTAAAACAATGTCGCTATATGAGCGTGACCACCGCATCGAGCTACCGTCGAACGTGAATACCGGTTGGCGCGTGGAAGTTCACCGCACAACGGCAGATTCCACATCGGCGAAAGTGGTGAACGATATTCAGGTACAATCAATTACTGAGATTATCGACGCCCGCCTGCGTTACCCGCTAACCGCGCTGTTGTTTGTGGAGTTCGACGCCAAAGCGTTCCAGAACATCCCGCGCGTGTCCATCAAGTGCAAAGGCCGCAAAGTTCTAATACCGAACAACTACGATCCGATTAATCATACATATTCCGGGGACTGGGACGGCACGTTTAAACGCGCATGGACGGATAACCCTGCGTGGCACTGGTACGATATTTGTATTACTGAGCGCTTCGGCCTCGGTCGGCGTATCAAACCGCAAATGTTAAACCGGTACGCGCTCTACCAGATTGCGCAGCGCTGCGATCAGTTGGTCAGCGACGGCAACGGCGGTCGAGAAATCCGCTTTAAGAACGATATGTACATCCAGTCGCAGACAGACGCCTGGACCGTGCTTAAGGATTTAGCAGCTATCTTTGCCGGTATGACTTGGTGGGGAAACCAGATGTTGAATATCGTAAGTGACCAGCCGGTCGCAGCGGTATCGCACACTATCACCAACGCCTCGGTTATTGATGGCAGATTCGACTACGCGTCAGGGAGCCAGAAAACTCGCTATTCCACTTTCGCGGTAGCATACGGCAACCCGAAAAACCACTACGACGATGCCATCGCAACGGGACAACGTGTCGAACTGGTACGCCGCCATAAGATTAACCGTCTGGATATAACGGCGATCGGCTGTACGCGTGAATCAGAAGCGCAACGCCGGGGGCACTGGGCGCTAATCTCCAACCAGCTTGACCAGCAAGTTAGCTTTAAGGTTGGCATGGAGGGACTATTCTTTATTCCGGGTAGCGTAGTCGCGATCGCCGATACAAACATTTCTGGTGGCTTCGAGACACGCGGCGGTCGCCTGTTGTCGGACCCTGGCACGCGTACCGTGCTTAACACGGACAGCGAAATCACGTTCCGCCCAGGAGATAAATTCCTGGTACGCACCGATAGCGGTAATGTGGAGTCTCGCGAGATTGCCAGCGTCAACGGCAACAAGGTTACGCTAAAAACCGCACTGGATGCCGACCCGATTCCAGATCAACCGTTTTGCGTGGATGGCAACGATATCCAGTTGCAGAAATTCCGCATCACCGACCTGGAATATGACGACTCTACCAGCACTTTCTCGGTGCGCGGGATCGAGTACAACGATAGTAAATACGATGCCGTTGATAATGGCGCTCGCCTTGATCCGGGCATCTTCACGCAAGTTCCTGACGGAGTAATGAAGGGGCCGGAGTCCGTGACCATTACGCCGTCGCAGATTTCATCGCAAGGCCAGCTAATCACCAACGTGGATATTGTATTCCCGCCGGTGAAGGATGCCGTGGTGTATGAAATCCAGTGGCGACGTACCAGCTTGCAGAATATGGCGGTCCAGTGGGGGAATGACTGGGTAAACATCCCACGTACGGCATCTAACGGCGCGCACATCCCGAACGTGTTTTCCGGTAACTACCAGGCACGCGTCCGCGCGATCGGTATGGGCGAGATTTCATCCCCGTGGGTGTCGTCTGCCATCACACCGATCGAAGGTCGTCTCGGCGGGCTTAACGCGCCTATCATCACCAACGCGATTTCGGGACTCCACCAAATTTTGTGGAAGTGGAACCACAACAACGCCGCGACGGATATTTCGTATACCGAGCTTGAAGTACGCAAGCTGGGCGAAACGGAATGGAAGTTCTTGACCAACGTCCCATATCCGGGGTCGGACTATGCGCAAACGTCGCTGGAGTTCGGCATCTACCAGCAGTTGCGCGCCCGCGTAGCGGATAAAATCGGCAACCTGTCGGACTGGTCCGCCCCGTTTGAAGGCCAGGTGAGTGACAAAGTTGACGAGTACATGAAGGGGCTTGATGACGCGTTCTTGACTTCCGAAGATGGTAAACACTTCCAGGAAGCAATAGACACCATTCCGCAGGGCATTTATGAATCAATGCTCACGGACGCCCAGCAGCTATTCAATGCCCGCGCCGAGTATCAAGGTATTTACGCAGAAATCAAGGTGGCGTATAACGTGGCAGCGGATGCCCACAAGGCGGTCGCACAACTTGAGACGCTGATCGGCACTCGCCTTGACGATGCGGAAGCGGCGATCCACACGTTGCAGACAGCGCAAAGCACGCATGAACAAGCGTTCGCCCAGTACCAGCAAACTGTTGCCGCTAAGTTCGGTGAACAGGAAGCCGCCATCGATCAGGTACAAACGGCAACGGCAGACGTAGCGGGCGCACTGGCGGAGTATAAGACCCAGGTCGCGGCGCAGTTCGGTCAGCAGTCCGCAGCTATCGAGCAGAAGATGACGTCCTCGTTTAACCATGCTGGCGGTAGCGCCACATATAGCCTTAAAGCTGGCGTGACGTATAACGGAACTTATTATGATGCCGGTATGCAGCTTTCAGTTGTGGCGGAAGGCGGCGCGGTTAAATCCCGCATCGCGTTCAAGGCGGACCAGTTCTACATCATGCACCCGTCGAATGGGTCGCTTTCGTCCGCGTTTATCGTTGACGGCGGTCAGGTGTACATCGACACGGCGCGCATCAAGAACGCGTCCATCAACTTCGCACAGATCACGGACACGCTGCAATCGAATAACTGGAATCCGGGGAGCAGCGGCTGGCGTATCGCGAAGGATGGCGGGGCGGAGTTCAACAACGTCACGGTCCGCGGCAACTTGTACGCGACTACGGGTAATTTCGGATTCTCCGGCGGGTCCGTTACGATCGACTCAACGGGCGTTAACGTGCCATTACCTGGCGGTGGTAGGGTGAAAGTAGGGACGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c88a3756666ceaf352b4c27255fb89240a0408185b25ad192e67b3efa84bd471
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7804
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Virulent Bacteriophage Infecting Escherichia coli K99 Son,J.S., Paik,H.R., Park,S.H., Kim,B.K., Jun,S.Y., Yoon,S.J. and Kang,S.H. 2013-05-07 — GenBank