Protein

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Genbank accession
AFC21413.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,81
Protein sequence
MFPIPSLFLLMAGGGTTPLPPGGVKKIAFSREQTSGVKRSMAILLTDGRLYTQGDNAWGECADGTTSPFYDHWKLAASNVADVFGVGKAFVVKYNSGGWQYAGDQGQFTGSTSNMMAWTSFPSSITGTVNLANLVSVVGGGGNTLWIMSNGTLYGSGPNANGCLGSGNSNPIPTPRTISTSCIRAFGLNACVTYLNNVGVPRVCGSTYGINGSFTPITSFASVTFPGATGTIYAKEWMCNEDNTIAIASAGASDTDHYLYTRGITTNNATYTKVSGFGPFTTFRVLDGGQSRFFIADDALYALGDSQRNLGLGDTTTSVTVPTVIPVPTGADWDLSKLTFVAEMKGDNMSQGATLGHWMVYDGNLFYTGSPKGFFGSTTIVGKFTNVPENSFEGIRADSITTGSIGVAIVGTTKQLTWSIDPPGAEIYDLQFSSSHPEFATIDANGLMTFVAEGGFDITMTAKTGTSATTLTDTSGGYVSTLGMATDSLSAMTVGETKQLVYTVTPAGVENLDGYSITFSSEDPAVATVSPTGLITAVADGGTRIHATAAVQTVTADDSSYLSVNAP
Physico‐chemical
properties
protein length:567 AA
molecular weight: 58976,14640 Da
isoelectric point:4,64456
aromaticity:0,09877
hydropathy:0,03245

Domains

Domains [InterPro]
DC_0065
STR
1–534
DC_0065
IPR009091
STR
24–335
IPR009091 G3DSA:2.60.40.1080 IPR003343
IPR009091
STR
40–410
IPR009091 G3DSA:2.60.40.1080
IPR003343
STR
396–472
IPR003343 IPR008964
IPR003343
STR
409–472
IPR003343 IPR003343
IPR008964
RBD
409–469
IPR008964
AFC21413.1
1 567
Architecture
STR
STR 1-564 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFC21413.1
1 567
Domain Start End Length (AA) Confidence
N-terminal 1 26 26 0,0005
Central domain 27 237 212 0,6097
C-terminal 238 567 329 0,1024
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-26
Central
27-237
C-terminal
238-567

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_GAP31
[NCBI] 		1141135 Uroviricota > Caudoviricetes > Vequintavirinae > Seunavirus GAP31 >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFC21413.1 [NCBI]
Genbank nucleotide accession
JN882284 [NCBI]
CDS location
range 126763 -> 128466
strand +
CDS
ATGTTTCCTATTCCAAGCCTGTTCCTGCTAATGGCAGGTGGTGGTACAACACCACTGCCTCCTGGCGGGGTGAAAAAGATCGCTTTCTCCAGAGAACAAACGTCTGGTGTAAAAAGATCTATGGCTATTCTTCTAACAGACGGAAGACTCTACACCCAAGGTGATAATGCCTGGGGTGAATGTGCAGATGGGACGACAAGCCCATTCTATGATCATTGGAAACTTGCTGCAAGCAATGTAGCAGATGTTTTCGGTGTTGGAAAGGCTTTTGTAGTAAAATACAATAGCGGGGGCTGGCAATACGCTGGTGACCAAGGCCAGTTCACAGGCTCAACGTCTAATATGATGGCATGGACAAGCTTCCCGTCTTCAATTACGGGCACTGTTAATCTGGCGAATCTTGTTAGTGTGGTTGGTGGGGGTGGTAATACCCTTTGGATCATGAGTAACGGAACCCTCTACGGGAGTGGTCCTAATGCAAACGGATGCCTTGGGTCGGGCAACTCAAACCCTATCCCAACACCACGCACAATCAGCACCTCTTGCATACGTGCTTTTGGTCTTAATGCTTGCGTAACCTACCTCAATAACGTAGGTGTTCCTCGTGTTTGCGGGTCTACTTACGGTATCAATGGCTCATTTACACCAATCACCAGTTTCGCAAGTGTAACATTCCCAGGGGCCACCGGAACAATCTATGCAAAAGAGTGGATGTGCAACGAAGACAACACGATTGCGATTGCCTCTGCTGGTGCGTCTGATACCGATCATTATCTGTATACTCGTGGCATCACAACAAACAACGCAACGTACACAAAAGTTAGCGGATTCGGTCCATTCACAACATTCCGTGTCCTGGATGGTGGTCAGTCGAGATTCTTTATTGCTGACGATGCTCTGTATGCGTTGGGGGATTCGCAGAGAAACCTCGGACTTGGAGACACCACCACTTCGGTTACAGTCCCTACTGTGATTCCTGTTCCTACTGGCGCAGATTGGGATCTTAGCAAGTTGACTTTTGTTGCCGAAATGAAGGGCGATAACATGTCTCAAGGCGCGACACTTGGACACTGGATGGTTTATGACGGTAACCTGTTCTATACGGGTAGTCCAAAAGGCTTCTTTGGCAGTACAACAATTGTAGGAAAATTCACAAACGTGCCAGAAAACTCCTTCGAAGGTATACGTGCCGACTCTATCACCACAGGGTCTATCGGCGTGGCGATTGTTGGTACTACTAAACAGCTTACGTGGTCTATCGACCCACCTGGTGCTGAAATCTATGACCTACAGTTTAGCTCAAGCCATCCAGAGTTTGCAACAATTGATGCGAATGGTCTTATGACCTTCGTTGCTGAGGGTGGTTTTGATATCACCATGACAGCGAAGACAGGGACAAGTGCAACAACCTTGACAGATACTTCAGGTGGTTATGTTTCAACACTTGGAATGGCTACTGATAGCCTTTCTGCGATGACTGTTGGTGAGACAAAACAGCTTGTTTATACGGTCACACCAGCGGGTGTTGAGAACTTGGATGGTTACTCGATCACCTTCTCCAGTGAAGATCCTGCGGTAGCAACCGTAAGCCCTACAGGACTGATTACCGCAGTTGCTGACGGAGGAACTCGTATCCACGCAACAGCAGCAGTTCAGACTGTAACAGCAGACGATAGCTCTTATCTGTCAGTGAACGCTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eb6cdd7621d68104858388fc4a0a39d8454c046da2733bd57b7c3172b80d482d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8396
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50