Protein

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Genbank accession
XJP11700.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MSLIKVKTGLIQAGSSSTPAAIRAQSGVLSIDPNDADVPSEVTADSSFDATSGILTLKFANGQSIKVGGFPTAADIPEGRQGGRGETGADGKDGRDGRDGSPGEQGCDGNIGPDGEQGLPGPDGRDGLPGPVGPTGPDGRTGPMGPTGPTGPRGGTGPTGATGATGPTGPTGPAGPAGRLSIIVSATNPGNVAAGTIWVDPTKDQNITWP
Physico‐chemical
properties
protein length:210 AA
molecular weight: 20327,95810 Da
isoelectric point:4,49121
aromaticity:0,02381
hydropathy:-0,48952

Domains

Domains [InterPro]
DC_1829
ATT
1–76
DC_1829 IPR008160
PTHR24637
Unmapped
64–179
PTHR24637
DC_0656
STR
121–209
DC_0656
XJP11700.1
1 210
Architecture
ATT
STR
ATT 1-76 | STR 78-209 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phB78
[NCBI] 		3236633 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XJP11700.1 [NCBI]
Genbank nucleotide accession
PP942979.1 [NCBI]
CDS location
range 71261 -> 71893
strand -
CDS
ATGAGTCTGATTAAAGTTAAGACCGGTCTCATTCAGGCTGGTTCTTCGTCTACGCCTGCTGCAATTCGCGCTCAGTCTGGAGTTCTTTCGATAGACCCAAACGATGCCGATGTGCCCTCAGAGGTAACTGCTGACTCCTCGTTTGATGCGACTTCTGGTATTCTTACTCTCAAGTTCGCTAACGGGCAGTCGATTAAAGTAGGTGGGTTCCCAACCGCTGCGGATATACCTGAAGGACGACAGGGAGGCAGAGGTGAAACGGGTGCTGATGGTAAAGATGGTCGTGATGGGCGAGACGGCAGTCCAGGTGAGCAGGGTTGTGACGGTAATATCGGACCTGATGGTGAGCAGGGTCTTCCCGGCCCAGATGGTCGTGATGGTCTACCCGGGCCTGTCGGTCCTACTGGCCCAGACGGTCGCACAGGCCCAATGGGTCCTACAGGCCCTACTGGCCCTCGTGGCGGTACGGGTCCTACTGGCGCAACAGGTGCTACAGGCCCTACCGGACCAACTGGCCCTGCGGGTCCTGCCGGTCGTCTGTCTATCATCGTAAGTGCTACGAACCCAGGGAACGTTGCTGCTGGCACCATCTGGGTAGACCCGACCAAAGATCAGAATATAACTTGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7f0ed47fffd12766d9f8f52c03f84dfffdc27389094d17b7b0cb17cd518eaf6c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage phB78 Yang,L.Y., Zheng,Y.Y. and Cui,B.M. 2013-12-26 — GenBank