Protein

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Genbank accession
AGO48337.1 [GenBank]
Protein name
phage tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,70
Protein sequence
MPQEIISQFDRKIALPIETYRQVLTISNRDSIPTSIRWQGMIVYVVSDSMSYILKGGTTNSDWVELGSLVNLTVRNNLTSTSTTDALSANQGRILNDTKIGDAPIDGAQYARKDGAWSVVVGGGGADASWGTITGTLSAQTDLQSALNNKLNLSGGTITGALTVNGEASFKFTPLKLIGTSTGDSNVSYISLNESNGSTRQGYIGFGSGSNSDFTIYNDRSSTSLKLDGSGGLNGFKYLNGSNTYNVWHSGNDGAGSGLDADLLDGQGGGSYLRSDAADSKTSGNLTIFDNIRTIYGSGGTNSQIFNSGRGAYIDLYNCDLFIRDSSTTRFTFERSTGKIQATAYKTPAWEIVQNGNNLEFKYSGVVKFRMNTTGIVNATDFKLGL
Physico‐chemical
properties
protein length:386 AA
molecular weight: 41121,84320 Da
isoelectric point:5,33777
aromaticity:0,09067
hydropathy:-0,31088

Domains

Domains [InterPro]
DC_1600
STR
42–386
DC_1600
IPR054500
STR
76–98
IPR054500 G3DSA:6.20.230.10
SSF58046
ATT
82–118
SSF58046
AGO48337.1
1 386
Architecture
STR
ATT
STR
STR 42-81 | ATT 82-121 | STR 122-386
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGO48337.1
1 386
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9346
Central domain 141 339 200 0,0943
C-terminal 340 386 46 0,9330
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-386

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi17:1
[NCBI] 		1327980 Uroviricota > Caudoviricetes > Helsingorvirus >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGO48337.1 [NCBI]
Genbank nucleotide accession
KC821617 [NCBI]
CDS location
range 35610 -> 36770
strand +
CDS
ATGCCACAAGAAATAATATCACAGTTTGATAGGAAAATAGCATTGCCTATTGAGACGTACAGACAAGTACTCACAATAAGCAACAGGGACTCTATACCTACATCTATAAGGTGGCAAGGTATGATAGTTTATGTGGTATCTGATTCTATGTCCTATATCTTAAAAGGAGGCACGACCAATTCTGATTGGGTCGAGCTTGGTAGCCTTGTAAACTTAACCGTCAGAAACAACTTAACAAGCACAAGTACAACAGACGCTTTAAGTGCAAATCAAGGACGCATACTCAATGATACAAAAATTGGAGATGCTCCAATTGACGGGGCACAGTATGCCCGCAAAGATGGGGCCTGGTCTGTTGTCGTTGGAGGAGGTGGAGCCGATGCCTCATGGGGTACAATCACTGGAACGCTTTCAGCTCAAACAGATTTACAAAGTGCTTTAAATAATAAGCTCAATTTATCTGGAGGCACTATTACAGGGGCCTTGACGGTAAATGGGGAGGCTTCTTTTAAGTTTACCCCTTTAAAATTAATTGGCACTAGTACAGGAGATTCAAACGTCAGTTACATATCACTCAACGAGTCTAACGGATCCACTAGACAGGGTTATATTGGCTTCGGTAGCGGTTCAAACTCTGATTTTACTATATATAATGATAGGTCATCAACTAGCTTAAAACTTGATGGGTCTGGAGGTTTAAACGGCTTCAAGTACCTGAATGGGTCCAATACTTATAATGTGTGGCACTCTGGAAATGATGGTGCAGGGTCTGGATTAGATGCGGACTTATTAGATGGTCAAGGAGGAGGATCATATTTAAGATCTGACGCGGCAGATAGTAAGACGTCTGGAAACTTAACTATATTTGATAACATAAGAACTATTTACGGATCAGGCGGGACAAATAGCCAGATATTTAACTCTGGAAGAGGAGCTTATATTGATTTATATAATTGCGATCTATTTATTAGAGACAGCTCTACAACTAGGTTTACATTCGAGAGATCAACAGGAAAAATACAAGCAACAGCCTACAAGACTCCTGCATGGGAAATTGTTCAGAATGGGAATAATCTTGAGTTTAAGTACTCAGGAGTGGTTAAATTTAGAATGAACACTACAGGCATAGTTAATGCAACGGATTTTAAACTAGGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0747ec39af9cbbc44740230be2367b1768d0ff306a544854ed2bf11dec44e954
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7243
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50