Protein

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Genbank accession
CEK40723.1 [GenBank]
Protein name
protein of unknown function
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKLNENSSLKEIMDTLENTTKEIEDNKVIYDNAITIVDKKANFNDSTNVLNILYDDSYIYVLKASKLVKTDLNFNVIFSISYSNFECFCISEDYIYASTAENIYQINKTTGTINKTIANNFVNDMCFYNNILYCYKSSTATMILINASSNLFSINLTKDCASLSIKSFSSSGNIKVNSTGIYVLVQDSSDIASIYLLNHNLTQKIASAILRDSNAGRKIMLLNNGVYVSCNRGVMGYPGEGYFNKYTSNLSLQIKLSDSKYGNLVGLDNNSNYIYATKGLREYEHAKIVKFSSNLNELDSYEFEGYGSPNVIYKNYNIYVNGNIDNKTIARLASTKKFYVKREMF
Physico‐chemical
properties
protein length:346 AA
molecular weight: 39050,69280 Da
isoelectric point:7,47219
aromaticity:0,11850
hydropathy:-0,23006

Domains

Domains [InterPro]
Coil
Unmapped
7–27
Coil SSF63825
SSF63825
STR
53–234
SSF63825
CEK40723.1
1 346
Architecture
STR
STR 50-234 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CEK40723.1
1 346
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,2915
Central domain 91 289 200 0,2341
C-terminal 290 346 56 0,6639
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-289
C-terminal
290-346

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD506
[NCBI] 		1582155 Uroviricota > Caudoviricetes > Sherbrookevirus >
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEK40723.1 [NCBI]
Genbank nucleotide accession
LN681540 [NCBI]
CDS location
range 16433 -> 17473
strand +
CDS
ATGGCAAAGTTAAATGAAAATAGTAGTTTGAAAGAAATAATGGATACTCTTGAAAATACTACAAAAGAAATAGAGGATAATAAAGTCATATATGATAATGCAATTACAATAGTTGATAAAAAAGCAAATTTTAATGACTCAACAAATGTTTTAAACATTCTTTATGATGATAGTTATATCTATGTATTAAAAGCATCAAAATTAGTAAAAACAGATTTAAATTTTAATGTTATTTTCTCAATAAGTTATTCTAATTTTGAATGTTTCTGTATTAGTGAAGATTATATTTATGCTTCTACAGCAGAAAACATATATCAAATTAATAAAACTACTGGAACTATTAATAAAACTATAGCTAATAATTTTGTTAATGATATGTGTTTTTATAATAATATTTTATATTGTTATAAGAGTAGTACAGCTACTATGATACTAATTAATGCTTCTTCAAATTTATTTAGTATAAACTTAACTAAAGATTGTGCTTCTCTTTCTATAAAAAGTTTTTCATCAAGTGGAAATATAAAAGTAAATAGTACAGGTATATATGTATTAGTACAAGATAGTTCTGACATAGCATCTATATATTTATTAAATCATAATTTAACTCAGAAAATTGCATCAGCAATTTTACGTGATAGTAATGCAGGACGTAAAATTATGTTGTTAAATAATGGAGTTTATGTATCGTGTAATAGGGGAGTTATGGGTTATCCAGGAGAAGGTTATTTTAATAAATATACTTCAAACTTAAGTTTACAAATAAAATTGTCTGACAGCAAATATGGAAACTTAGTGGGATTAGATAATAATAGTAATTATATTTATGCAACAAAGGGTCTACGTGAATATGAACATGCAAAAATAGTAAAGTTTTCAAGCAATTTAAATGAACTAGACTCATATGAATTTGAGGGGTATGGTTCTCCAAATGTAATTTATAAAAATTATAATATTTATGTGAATGGTAATATTGATAATAAAACTATAGCAAGGTTGGCATCAACAAAAAAATTCTATGTGAAAAGGGAGATGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
45c1faf5f3ca5bc77d431d547cca3340dceb22e9430a1a9c5f8a56629f06ed67
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8035
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank