Protein

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Genbank accession
QNM37888.2 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MSTITQFPSGNTQYRIEFDYLARTFVVVTLVNSSNPALNRVLEVGRDYRFLNPTMIEMLVDQSGFDIVRIHRQTGTDLVVDFSNGSVLTASDLTNSELQSIHIAEEGRDQTVDLAKEYADAAGISAGNAKDSEDKARQIASSIKSAGLIGYIARRSFKKGFNITAWNEALLWEADGDYYRWEGALPKNVPAGSTPESSGGISAGAWVNVGDGPGAWVNVGDIFEQKVYVVVITGQSNAQGANSGGPNPASPNVKVWDGTTNTWGVVIIRNYLSPKAPLMVMAGITTLLWLLLIVYLINIGIPKFTLSTILLAGVLLTIGSVLALHPFVTPQSKLKRLHWLHLNYSLPVKLRLITSSGRKGRRCTDWYHYGLPCSVSNLGYTIPFRSVDGESYPLFVMGMSGLHTRYQVWQGQLSYCENQNRNCIYVNSMGLKTQYDVSGTGDYTHWLGDSLWEHGYHRIWYALQERGITHRNQLAPFYGRGTGPWDGQPDAIAMFSSLVSIDSATSQFPTNSVAATGSITWGLNCAADGNYTFAGGHTVTTDNTCNYSAAWGRSISLGPGAQYSASFGRENNVTGNHQFAVGRGHTTSSDGETCLGTYSFYVSEQENKVKLQVGVGSSSSVKKNAITAREDGAVEINVSSSHEPAQKVKWYSMQNLILRYVSKFVVLMV
Physico‐chemical
properties
protein length:669 AA
molecular weight: 73122,45890 Da
isoelectric point:7,23733
aromaticity:0,10314
hydropathy:-0,15770

Domains

Domains [InterPro]
IPR005604
ATT
10–113
IPR005604 G3DSA:2.10.10.80 DC_0394
IPR005604
ATT
10–105
IPR005604 DC_1280 IPR011049
IPR040775
RBD
155–211
IPR040775 IPR011049
QNM37888.2
1 669
Architecture
ATT
RBD
STR
RBD
ATT 10-213 | RBD 451-499 | STR 500-634 | RBD 635-659 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNM37888.2
1 669
Domain Start End Length (AA) Confidence
N-terminal 1 346 346 0,8901
Central domain 347 554 209 0,8086
C-terminal 555 669 114 0,8614
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-346
Central
347-554
C-terminal
555-669

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage NS1
[NCBI] 		2766968 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Kayfunavirus
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNM37888.2 [NCBI]
Genbank nucleotide accession
MN715150.2 [NCBI]
CDS location
range 32955 -> 34964
strand +
CDS
ATGTCCACGATTACACAATTCCCTTCAGGAAACACTCAGTACAGGATTGAGTTCGACTACCTAGCCAGAACGTTTGTTGTTGTTACGCTGGTGAATAGCTCTAACCCTGCCCTGAACCGTGTACTGGAAGTTGGTCGAGATTACCGATTCCTTAATCCAACGATGATTGAGATGTTGGTTGACCAATCAGGTTTCGACATCGTTCGTATTCACCGTCAGACTGGAACTGACTTAGTGGTAGACTTCAGTAATGGCTCAGTGTTGACAGCTAGTGACCTGACCAATTCAGAGCTTCAGTCTATCCATATTGCAGAAGAAGGTCGAGACCAAACTGTTGACTTAGCGAAGGAATATGCCGATGCTGCTGGTATCTCTGCTGGCAACGCTAAGGATAGCGAGGACAAAGCGCGACAAATTGCTTCGAGTATCAAGTCAGCCGGTCTAATTGGCTATATCGCCCGTCGCTCCTTCAAGAAAGGCTTCAACATTACAGCATGGAACGAGGCCCTGCTATGGGAAGCGGATGGTGATTATTACCGCTGGGAAGGTGCGCTTCCAAAGAACGTTCCTGCTGGTTCAACTCCTGAATCATCTGGTGGTATTAGTGCCGGGGCTTGGGTTAATGTTGGTGATGGTCCGGGTGCTTGGGTTAATGTTGGTGATATCTTTGAGCAGAAGGTTTACGTAGTAGTAATCACTGGGCAGTCAAATGCTCAGGGTGCTAACTCCGGTGGACCTAATCCAGCGTCACCTAATGTTAAAGTATGGGATGGTACTACTAATACTTGGGGAGTAGTGATTATACGCAATTACCTTTCTCCCAAAGCACCCCTAATGGTAATGGCGGGAATAACAACATTGCTCTGGCTTTTGCTCATCGTCTACTTGATCAACATAGGAATTCCAAAGTTTACGTTATCTACGATCCTGTTGGCGGGCGTCCTATTAACGATTGGGTCGGTTCTGGCACTGCATCCATTCGTTACGCCGCAATCAAAGCTAAAGAGGCTGCATTGGCTACACCTGAATTACTCACTGCCGGTAAAACTAAGATTGATTACCTCATCTGGGCGCAAGGGAAGGAGATGCACTGACTGGTACCATTACGGTTTACCGTGCTCAGTTTCAAACCTTGGATACACAATTCCGTTCCGAAGCGTGGATGGAGAATCATACCCCCTGTTTGTGATGGGTATGTCTGGTCTTCATACTCGTTATCAGGTATGGCAAGGACAATTGAGTTACTGTGAGAACCAGAACCGTAACTGTATTTACGTTAACTCTATGGGCCTAAAGACTCAGTATGACGTATCAGGTACAGGTGATTATACACACTGGTTGGGTGATTCACTGTGGGAGCATGGTTATCATCGTATCTGGTATGCACTCCAAGAACGAGGCATTACTCACCGTAACCAACTGGCTCCGTTCTATGGACGTGGTACTGGTCCGTGGGATGGGCAGCCTGATGCAATTGCTATGTTTAGTTCTCTGGTAAGTATTGACTCAGCAACATCTCAGTTTCCAACCAATAGTGTAGCTGCTACTGGTTCCATTACTTGGGGACTGAACTGTGCAGCAGATGGTAACTACACCTTCGCAGGCGGTCATACTGTAACAACGGATAATACATGTAACTACTCTGCTGCATGGGGTAGGAGCATCTCACTGGGACCCGGTGCTCAGTATAGTGCAAGTTTCGGTAGGGAGAACAACGTAACTGGTAATCACCAGTTTGCAGTTGGTCGAGGCCACACTACCAGCAGTGACGGTGAAACCTGTCTAGGTACTTACTCGTTCTATGTGTCAGAGCAAGAAAACAAGGTGAAGCTACAGGTTGGCGTTGGTTCCTCCTCTAGTGTTAAGAAGAATGCCATCACAGCAAGGGAAGATGGTGCGGTAGAGATTAATGTATCATCTAGCCATGAGCCAGCACAAAAGGTGAAATGGTATTCCATGCAGAATCTAATACTTCGTTACGTATCAAAGTTCGTGGTACTGATGGTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
dd85cdc0841beeedf5672c512f92760c863ae8becbc5d22e1f740453bda231c7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6405
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50