Protein

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Genbank accession
XPK42577.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANVIKTVLTYQLDGSNRDFNIPFEYLARKFVVVTIIGVDRKVLTINTDYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPFGQLKTMNQNSWQARNEAQGFRNEAETFRNQAEGFKTESGTNAANTKQWRDETKGFRDEAEQFKNTAGQYATSAGNSATAAHQSEVNAGNSATASANSANLAEQQADRAEREADKLGNWNALAGAIDSVDGNNVMFKGDIRTPNNIVGGGLISNGAGHFEKGVRIREGLDVIGDIAAHKDVWVDGVVVANGGIQQQSGPNSSNDMWRLYIKGGPRYIGYSQGLHLGWNESGGWGESCFVTNKGAGSGGFVFRTVNFENSVEIGRVTFNGNGGVRAYDFQTVNGARIEAGNNIVCASIFAGMGGCALDTVGNLVNGVWNNVGGDLYNYLQNKSHFAKPPAGVKLFTSRGGDYLEGVVDATAVGFRWFNSDRRLKENIKVVRSADDMLKIIRSYIPVSYKYKDSEHVDKRGRTVSVTGKNSRAGFITQDLIRIWPEAVDVLSDGMQSPDPNQIIGGLMLLVKNLDERVQELEKK
Physico‐chemical
properties
protein length:622 AA
molecular weight: 67842,63520 Da
isoelectric point:6,15307
aromaticity:0,08360
hydropathy:-0,42926

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil IPR030392
DC_0264
STR
1–612
DC_0264
IPR030392
CHP
518–586
IPR030392 Coil
XPK42577.1
1 622
Architecture
ATT
STR
CHP
ATT 1-131 | STR 132-612 | CHP 613-622
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK42577.1
1 622
Domain Start End Length (AA) Confidence
N-terminal 1 183 183 0,9825
Central domain 184 382 200 0,6397
C-terminal 383 622 239 0,7863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-183
Central
184-382
C-terminal
383-622

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage MeretOppenheim_Bas102
[NCBI] 		3398427 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK42577.1 [NCBI]
Genbank nucleotide accession
PQ850620.1 [NCBI]
CDS location
range 37728 -> 39596
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCAGTTAGATGGCTCCAATCGTGATTTTAATATTCCGTTTGAGTATCTAGCCCGTAAGTTCGTAGTGGTAACCATTATTGGTGTAGACCGCAAGGTCCTTACGATTAATACAGACTATCGTTTTGCTACTCGTACTACCATCTCACTGACCAAGGCTTGGGGTCCAGCGGATGGATACACGACCATCGAGTTGCGCCGAGTAACCTCCACGACAGACCGCTTGGTTGACTTTACGGACGGCTCAATCCTCCGTGCGTATGACCTAAACGTTGCTCAGATTCAAACGATGCACGTAGCGGAAGAGGCCCGTGACCTTACTGCTGATACCATAGGTGTCAATAATGATGGTCACTTGGATGCTCGTGGTCGCCGTATTGTGAACCTAGCGAACGCTGTGGATGACCGTGACGCTGTTCCGTTCGGGCAACTTAAGACCATGAACCAGAACTCGTGGCAGGCGCGTAATGAGGCTCAAGGTTTCCGTAATGAGGCTGAGACTTTCAGAAATCAAGCGGAGGGCTTTAAGACTGAGTCTGGCACTAACGCTGCTAATACGAAGCAGTGGCGTGATGAGACCAAAGGTTTCCGAGATGAAGCTGAGCAGTTCAAGAATACTGCTGGTCAATATGCTACATCTGCTGGCAACTCTGCTACCGCCGCACATCAATCTGAGGTAAACGCTGGGAACTCCGCTACAGCCTCCGCTAATTCCGCTAATTTGGCAGAACAGCAAGCAGACCGAGCGGAACGCGAAGCAGACAAGTTGGGTAACTGGAATGCACTTGCAGGGGCCATTGATAGTGTCGATGGTAACAATGTCATGTTTAAAGGGGACATTCGAACACCAAATAACATTGTAGGTGGTGGCTTAATCTCCAACGGTGCTGGTCATTTTGAGAAAGGAGTGCGTATTAGAGAGGGATTAGATGTTATAGGGGACATTGCGGCACATAAGGATGTGTGGGTAGATGGTGTGGTTGTTGCCAATGGCGGTATACAGCAACAATCAGGGCCTAATTCAAGTAACGATATGTGGCGACTGTATATTAAAGGGGGACCACGGTATATCGGATACAGCCAAGGTCTTCATCTTGGTTGGAACGAGAGCGGTGGGTGGGGTGAATCATGCTTTGTTACTAACAAAGGCGCAGGTAGCGGAGGTTTTGTTTTCCGCACGGTAAACTTTGAGAACAGTGTTGAGATTGGTCGCGTTACATTCAATGGTAACGGTGGGGTACGCGCCTACGATTTCCAAACAGTTAATGGTGCTCGTATTGAGGCTGGGAATAATATAGTTTGCGCGAGCATCTTCGCAGGAATGGGCGGCTGCGCGTTAGATACTGTAGGTAACTTAGTAAACGGTGTATGGAACAACGTTGGTGGTGATTTGTATAACTACCTACAGAACAAGTCCCACTTCGCTAAGCCACCTGCTGGGGTTAAATTGTTTACATCACGCGGTGGTGACTACCTTGAGGGTGTGGTGGATGCTACCGCTGTTGGGTTCCGCTGGTTCAATTCTGACAGAAGGCTTAAAGAAAACATAAAGGTTGTACGTTCCGCTGATGATATGCTTAAGATTATCCGCTCATACATCCCGGTTTCCTATAAGTATAAGGACTCTGAGCATGTTGATAAGCGCGGCAGAACGGTAAGTGTTACTGGTAAGAACTCTCGTGCCGGTTTCATTACTCAGGATTTGATTCGAATCTGGCCAGAGGCGGTTGACGTACTATCCGATGGTATGCAATCTCCAGACCCTAACCAAATCATTGGCGGACTAATGCTTCTTGTCAAGAACCTTGACGAACGCGTACAGGAGTTGGAGAAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e33f2923d8d8d6d75b794817e00c7f3de316c819f04b0ff2d381ce8edbca1f82
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6734
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank