Protein

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Genbank accession
AUR96487.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,59
Protein sequence
MPFGSIGGWAGFELGPAQNVFTGADRAAAELERDTYTAANPSWLAEYEVITGVKPNIRLEFLDGTEQAVAYQVRNSAGTAWADNESFLAIKGNTGDSDISNVGDGQIPVKDGETLVSSGMQKLPSGQILAPKNFGVESASIDFGDVITVSEQSSFLGIRDNSNGQSYIVVDFERNRDEPSRSPRIFTSTEAEVSDVVQPDDSTELTGTSLTFDYTTTLTAYTNAITLRAQSEMTNVRIKITPQGSAVGLKYIPQKSSWISGKEGLTLVAGDNEIDLFDSSLALESGTTLTVEIRADAISLLGAASGIPYLAVKKQNANFKSLVVKGAPVGALGGDTLAVQPNSSISASFTDPATTETITLNLDDGNHSGEDTIEFVFANNLGTNTVVFNASSDIGFFDTNSNEFVFSPQLTLTGRSARVVFEWYGNDWRIVR
Physico‐chemical
properties
protein length:432 AA
molecular weight: 46120,32780 Da
isoelectric point:4,32615
aromaticity:0,08565
hydropathy:-0,17315

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR96487.1
1 432
Domain Start End Length (AA) Confidence
N-terminal 1 164 164 0,9849
Central domain 165 363 200 0,1523
C-terminal 364 432 68 0,6752
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-164
Central
165-363
C-terminal
364-432

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.225.O._10N.261.48.B7
[NCBI] 		1881440 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR96487.1 [NCBI]
Genbank nucleotide accession
MG592592 [NCBI]
CDS location
range 25472 -> 26770
strand +
CDS
ATGCCATTTGGTAGCATTGGAGGCTGGGCTGGGTTTGAACTTGGTCCAGCACAGAATGTTTTTACTGGTGCGGATAGAGCAGCCGCTGAACTGGAGCGCGACACATACACGGCCGCGAATCCGTCATGGCTTGCGGAGTATGAGGTCATAACAGGCGTTAAGCCTAACATCCGTCTAGAGTTCTTAGACGGCACGGAGCAAGCTGTAGCGTATCAGGTTAGAAATAGCGCTGGCACTGCATGGGCTGACAATGAAAGCTTTCTAGCAATTAAGGGCAACACTGGCGACTCTGATATTAGCAATGTCGGAGATGGTCAGATACCAGTAAAGGATGGTGAGACTCTTGTTTCGTCAGGTATGCAAAAACTACCTAGCGGTCAGATCTTAGCCCCTAAGAACTTCGGTGTTGAATCTGCATCCATTGACTTTGGTGATGTCATTACAGTGTCTGAGCAGAGTTCGTTCTTGGGCATTCGAGACAACTCAAACGGGCAAAGCTATATCGTTGTAGACTTTGAGAGAAACCGTGACGAGCCATCTCGAAGTCCTCGCATATTTACATCAACAGAAGCTGAGGTTTCAGACGTAGTCCAGCCAGATGACTCCACAGAGCTAACAGGAACTTCACTAACATTTGACTACACAACAACCCTAACAGCTTACACGAACGCAATCACACTTCGGGCTCAGTCAGAAATGACCAACGTTCGAATTAAAATTACACCACAAGGTAGTGCAGTTGGCCTTAAGTACATCCCACAAAAGTCATCATGGATATCCGGCAAGGAAGGCTTAACGCTAGTAGCTGGCGATAATGAGATCGACTTGTTTGATTCATCACTTGCTTTAGAGTCTGGAACCACATTAACCGTAGAAATTCGAGCTGATGCAATCTCGCTGCTTGGTGCGGCTTCAGGAATTCCGTATCTAGCAGTTAAGAAGCAAAATGCCAACTTTAAATCACTTGTGGTCAAGGGCGCTCCGGTTGGTGCATTGGGTGGCGATACTCTAGCGGTTCAGCCAAACTCAAGTATTAGCGCATCGTTCACAGACCCTGCGACAACGGAAACCATCACGCTAAATTTGGATGATGGCAATCACTCGGGGGAGGATACGATTGAATTTGTATTTGCAAACAACCTTGGCACAAACACAGTTGTATTCAATGCGAGTTCAGATATTGGATTCTTTGACACCAACAGCAACGAGTTTGTGTTTTCACCCCAACTAACGCTTACGGGTCGATCTGCTAGGGTTGTTTTTGAATGGTATGGCAATGATTGGAGGATTGTACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b8666d389ebfa4d217c6e49cbe4ccc29363f1a5dc456c6f96e7765187fa12cbf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5464
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank