Protein

View in Explore
Genbank accession
QTZ59847.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTLFTKDDSGNIIDLSISAGGNISGNITQTGDYLQNGTYNLNGNQFVYAGKYIEFLPKTAGNGAWANQHKNKAPIFTDLSSTTSTSEYHPLIKQRYKDGTFSVGTLVNEGSFKIQYINESGDSKYWTFNRNGSFIVDNGSIEVRAGNISASGNINSATGFVSAPRVNTKNINLSSKTFIPNNDTGYDIVSLPTWVYNPPADGSDNTTNGLNYLRKLRASSASSIFHEIVDCRSGKPQEISWWTGVGPSSFQWAFDTTGRITAGKSISVGLPDSGTNGRYPLDSAISIGIAIGDNDTGIKWVRDGVIDLMANGISTATILNNGINSTKKLMVGYSRDSGSTWDFPNNNQAMFTARTDIDGNNNGDGQTHIGYNSNSKMYHYFRGRGRMSVSMAEGLIVEPGILDIKTGSNTLSLRADGTIASVQTLKLNNGLYFNGDGTNASLVFKAASGIDGTKSIVWEGGTRPGQNKSYVTVKAWGNAFNASGDRNRETVFEVADGQGYHFYSQRVAPAPGSTVGPIQLRVNGGLLTSGSIVASGSITTESSLSVNNGMSVNGELKVGGTADNFRIWNAKYGAIFRRSEDSLYIIPTPINQGESGGITDIRPFSINLGTGSVVMGNHAQAGKNLFTVDNVSKLVQTDVRFRVNMDSDGIVLNASSQAASNFIQGRKADVPKWYLGIGDGGNVVRLHNYTYSHGIALNSDSVDITKPLKVGNAQLRTDGNITNGSGNFANLNTTLNRKVNSGFITYGATAGWYKFATVTMPQSTSTVFFKIVGGSGFNSGLFTQCNIAEIVLRTSNERPSDLNAVLYTRTTGMYSAAFRNIAVNNVSGNTYDIYVYAGTYCNQLVCEWSCTENATVSVIGINSSTQSPVDALPDTAVNGQVANVLNNLVDRGKVKRYEADSEIAINSQTGIRIRSNGDKTGSVATMLRNDGGSFYILFTDKNATDGAATVNGDWNSKRPFAINLTTGEVMMNNGIAVRSAALFYNSINVKDNGSINFDKSGANPRNMRIFHAGDASRGNRIEIADETNYIAYFEKTPGGANRFVVNNATVGGVTQINSFGINTSNSLGGNSITFGDNDTGIKQNGDGLLDIYANSAQVFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFKPIENALDKVEKLNGVIYDKAEYIGGEAIETEAGIVAQTLQDVLPEAVRETEDSKGNKILTVSSQAQIALLVEAVKTLSARVKELESKLM
Physico‐chemical
properties
protein length:1254 AA
molecular weight: 134612,08240 Da
isoelectric point:8,46581
aromaticity:0,08612
hydropathy:-0,31372

Domains

Domains [InterPro]
DC_1954
STR
1–1253
DC_1954
IPR048388
ATT
684–757
IPR048388 IPR030392
G3DSA:6.20.80.10
STR
684–741
G3DSA:6.20.80.10 IPR030392 Coil
QTZ59847.1
1 1254
Architecture
STR
ATT
STR
STR 1-683 | ATT 684-757 | STR 758-1253 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QTZ59847.1
1 1254
Domain Start End Length (AA) Confidence
N-terminal 1 308 308 0,1090
Central domain 309 507 200 0,5005
C-terminal 508 1254 746 0,6811
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-308
Central
309-507
C-terminal
508-1254

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage TB004
[NCBI] 		2829145 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri 1c
[NCBI] 		1935181 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Shigella > Shigella flexneri

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QTZ59847.1 [NCBI]
Genbank nucleotide accession
MW822011.1 [NCBI]
CDS location
range 24034 -> 27798
strand -
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACCGCAGGTGCACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGATAGAACACTTTTTACTAAAGATGATTCGGGAAATATCATTGACTTAAGCATTTCCGCTGGCGGTAATATCAGTGGTAATATCACTCAAACTGGTGATTATTTACAAAATGGAACATATAATCTTAATGGAAACCAGTTTGTTTATGCAGGAAAATATATTGAATTTTTACCTAAAACTGCTGGTAATGGTGCTTGGGCAAACCAACATAAAAATAAAGCTCCTATCTTTACCGATTTGAGTTCAACGACTTCTACTTCAGAATACCATCCGCTAATTAAACAACGCTATAAAGATGGAACTTTTTCTGTTGGTACGTTAGTAAACGAAGGTAGTTTTAAAATTCAATATATCAATGAATCTGGTGATTCAAAATATTGGACTTTTAATCGTAACGGTAGTTTTATTGTAGATAATGGCAGTATTGAAGTCCGTGCAGGTAATATTTCTGCATCAGGCAATATTAACTCGGCAACTGGATTTGTTTCTGCACCGCGCGTCAATACAAAAAATATTAACCTGAGTTCTAAAACCTTTATACCGAATAATGACACGGGTTATGACATTGTTTCTTTACCTACCTGGGTTTATAACCCACCGGCAGATGGTTCCGACAATACTACAAATGGATTGAACTATTTGCGTAAATTACGTGCATCAAGTGCATCAAGTATTTTCCATGAAATTGTTGATTGTCGTTCGGGAAAACCACAAGAAATTTCTTGGTGGACCGGCGTAGGACCTTCGTCTTTCCAGTGGGCATTTGATACCACTGGACGTATTACCGCAGGTAAATCTATTTCAGTAGGTCTTCCTGATAGTGGTACAAATGGCCGTTATCCACTTGATTCTGCAATTTCTATTGGTATTGCGATTGGCGATAACGATACCGGTATTAAATGGGTCCGCGATGGCGTTATTGACTTAATGGCTAACGGTATTTCAACCGCTACCATTTTGAATAATGGTATTAATAGTACTAAAAAATTGATGGTTGGTTATAGTCGAGATTCCGGTTCTACTTGGGATTTCCCAAATAACAACCAAGCAATGTTTACTGCACGCACCGATATTGATGGTAATAATAACGGCGATGGTCAAACTCATATCGGTTATAACAGTAATTCTAAAATGTATCACTATTTCCGTGGCCGGGGCCGTATGTCAGTTAGTATGGCAGAAGGTTTAATTGTTGAGCCAGGTATTTTAGACATTAAAACTGGCTCAAACACATTATCTTTACGAGCCGACGGTACAATCGCTTCTGTTCAAACATTAAAACTTAATAATGGATTATATTTTAATGGTGATGGAACTAATGCTTCTCTAGTTTTTAAAGCAGCTTCAGGTATTGACGGCACTAAATCTATAGTGTGGGAAGGCGGTACCCGCCCAGGTCAGAATAAGAGTTATGTAACTGTTAAAGCATGGGGTAATGCATTTAACGCATCTGGTGATCGTAATCGTGAAACCGTTTTTGAAGTAGCTGATGGGCAAGGTTACCATTTTTATTCTCAACGCGTAGCTCCTGCACCTGGTTCGACTGTCGGCCCTATTCAACTCCGAGTTAATGGTGGTTTATTGACTTCAGGCAGTATTGTTGCTTCTGGTTCTATTACAACCGAATCTTCTTTGAGTGTTAATAATGGCATGTCAGTAAACGGCGAATTAAAGGTCGGTGGCACCGCAGATAACTTCCGTATTTGGAACGCTAAATACGGTGCTATTTTCCGTCGTTCAGAAGATTCCTTGTATATAATTCCTACACCCATTAACCAAGGCGAAAGCGGTGGAATAACCGATATAAGACCATTCAGTATTAACCTTGGAACTGGCTCCGTTGTAATGGGTAACCATGCTCAAGCGGGTAAAAACCTTTTCACGGTTGATAACGTTTCTAAATTAGTACAAACTGATGTTCGTTTTCGTGTTAACATGGATTCCGACGGTATTGTTTTGAATGCTTCTTCTCAAGCAGCGTCTAACTTTATCCAAGGACGTAAGGCTGATGTGCCTAAATGGTATTTGGGTATTGGTGACGGTGGTAACGTTGTTCGTTTACATAACTATACCTATTCCCACGGTATTGCATTAAACTCTGATTCTGTCGATATTACTAAGCCTCTTAAAGTCGGAAATGCCCAACTAAGAACTGACGGTAATATTACCAATGGTTCAGGAAACTTTGCCAACTTAAATACCACGTTAAATCGTAAAGTTAATTCTGGATTTATTACTTATGGAGCAACTGCTGGATGGTATAAGTTTGCAACAGTAACAATGCCACAATCCACTTCAACAGTCTTCTTTAAAATAGTTGGAGGTTCTGGATTTAATAGCGGATTATTCACCCAATGTAATATTGCTGAAATTGTTTTACGTACTAGTAATGAAAGACCTTCTGACTTAAATGCTGTATTATACACAAGAACAACTGGAATGTATAGCGCAGCATTTAGAAATATTGCAGTTAACAATGTCTCTGGAAATACATATGACATTTATGTTTATGCTGGAACATATTGTAATCAACTAGTTTGTGAATGGTCATGTACCGAAAATGCTACTGTTAGCGTTATTGGTATTAACTCATCTACGCAGTCGCCTGTAGATGCTCTCCCAGATACAGCAGTTAACGGTCAAGTTGCTAATGTTCTTAATAACTTGGTTGATCGTGGTAAAGTTAAGCGTTATGAAGCCGATTCTGAAATAGCTATTAATAGCCAAACCGGTATTCGTATCAGAAGCAATGGCGATAAAACTGGTTCTGTTGCTACAATGCTACGAAATGATGGCGGCAGTTTTTATATTCTGTTTACAGATAAAAATGCCACCGATGGCGCAGCAACTGTTAATGGTGATTGGAATAGTAAGCGTCCTTTTGCAATTAACTTAACAACCGGCGAAGTGATGATGAATAATGGCATAGCTGTTCGCAGCGCTGCTTTATTCTATAATAGCATAAACGTCAAAGATAACGGTTCTATTAACTTTGATAAATCAGGTGCTAACCCGAGAAATATGAGAATATTTCATGCTGGCGATGCTTCTCGCGGTAACCGCATTGAAATTGCAGATGAAACTAACTATATTGCTTACTTTGAAAAGACTCCAGGTGGAGCTAACCGCTTTGTAGTAAATAATGCTACTGTGGGTGGTGTTACTCAAATAAATTCATTTGGTATTAACACATCAAACTCTCTTGGTGGAAACAGTATAACATTTGGTGATAATGATACTGGTATTAAGCAAAATGGCGATGGATTATTAGACATATATGCGAACAGCGCACAAGTATTCCGTTTCCAAAACGGTGATTTGTACTCATACAAAAATATAAATGCTCCAAACGTTTATATTCGTTCTGATATTCGTTTAAAATCCAACTTTAAACCTATCGAAAACGCACTTGATAAAGTTGAAAAACTTAACGGTGTCATTTACGATAAAGCTGAATACATCGGTGGAGAGGCAATTGAAACTGAAGCGGGTATTGTGGCTCAAACGTTGCAAGACGTTTTACCAGAAGCTGTCCGTGAAACAGAAGACAGTAAGGGTAATAAAATACTCACTGTTTCTTCTCAAGCCCAGATTGCTCTTCTGGTTGAAGCTGTGAAAACACTTTCTGCTCGTGTAAAAGAACTTGAATCTAAACTTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
758d30060674850eb127d8a77aab9cbc1a947219d9a4a55de88b2c34ea8e87f7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5256
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of Lytic Bacteriophages Infecting Shigella spp. Biswas,S.K. and Tang,S.-S. 2025-02-10 — GenBank