Protein

View in Explore
Genbank accession
QQO90859.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAYSTQRSVSDGTLRVLGITIEFFDKSEITAYFDNVPTTAYVWATDNSLRFNANVPNGVEVLIRRTTDLSSVRHVFSLGAQFKDSTLDDDFKQILHIAQEAVEGANVGDIYSDLNMHGNKITNVGPAVADGDAVSLGQVRTESQGAWQAASQAAASAATATAAAGNAAASVTAAAGSASAAAGSASAAAGSASTASTAAGTATTQAGNSATSATLAQRWAAELEDVVVAGGQYSAFHYSRKAAASAATATTQAGNSLTEANRAKAEADRAQGYAASLNLPSGLGKAGMSLTQNITETGLEYRAIPQRNLLINSAFQIWQRVVTGVNLNGFMADRWRVTPTGAGTYVVGNAQVGSQRAHRFTVSSLGSLSQLQLEQRVEDLEAVLDNSYVTVSFYGRMGAGSGVQVRAALVQNCGVGGSAAVTTTSPAQTMAATTTLTRYEFRIQLPTNAGKTVGANSYLGVQLLFTGLATGQVIDVLNVKAEEGFRATPYERPLIGDELLRCQRYFWRTQPIDWNWSGYAADAIASRYTKLPVAMRGGAVLTTNANSPSASGGADLNRLSIALSAYQDEIRWICYSTVANTSIYIGFNSNNYIQVEAEL
Physico‐chemical
properties
protein length:599 AA
molecular weight: 62795,93760 Da
isoelectric point:5,69779
aromaticity:0,07846
hydropathy:-0,06995

Domains

Domains [InterPro]
IPR005604
ATT
3–105
IPR005604
DC_0568
STR
50–599
DC_0568
QQO90859.1
1 599
Architecture
ATT
STR
ATT 3-105 | STR 106-599
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Misse
[NCBI] 		2801386 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO90859.1 [NCBI]
Genbank nucleotide accession
MW286267.1 [NCBI]
CDS location
range 35589 -> 37388
strand +
CDS
ATGGCCTACTCGACCCAGCGTTCCGTCTCTGACGGGACGTTGCGGGTTCTCGGCATCACTATCGAGTTCTTCGACAAGTCCGAGATTACCGCGTACTTCGATAACGTTCCAACCACGGCTTATGTCTGGGCAACCGACAACAGCCTACGCTTTAACGCGAACGTCCCGAACGGCGTAGAGGTTCTGATCCGACGCACTACTGACCTCTCGTCGGTACGGCATGTGTTCAGCCTCGGTGCTCAGTTCAAGGACAGCACACTGGATGACGACTTCAAGCAGATCCTCCACATCGCCCAAGAGGCGGTAGAGGGTGCGAACGTAGGCGACATCTACAGCGACTTGAACATGCACGGGAACAAGATCACCAACGTCGGCCCTGCCGTTGCGGATGGTGATGCTGTGTCGCTGGGTCAGGTCCGTACCGAGTCCCAAGGCGCATGGCAGGCTGCTAGCCAAGCTGCGGCTTCTGCTGCAACTGCCACCGCTGCTGCTGGTAATGCTGCTGCGTCGGTTACGGCTGCTGCGGGTTCCGCCTCTGCTGCCGCTGGCTCAGCTTCCGCTGCTGCCGGTTCGGCTAGCACTGCGAGCACTGCCGCTGGTACTGCTACGACTCAAGCGGGTAACTCCGCAACCTCCGCCACCCTCGCACAGCGCTGGGCAGCAGAGCTTGAAGACGTGGTTGTGGCCGGTGGGCAGTACAGCGCGTTCCATTACTCCCGCAAGGCCGCAGCAAGCGCCGCCACGGCTACCACACAGGCAGGCAACTCCCTGACTGAAGCTAACCGCGCCAAGGCTGAAGCAGACCGCGCACAGGGCTACGCCGCCAGCTTGAACCTCCCCTCGGGGCTGGGTAAGGCAGGTATGTCCTTGACTCAGAACATCACTGAGACTGGGTTGGAGTATCGGGCGATCCCACAGCGGAACCTCCTGATCAACTCCGCGTTCCAAATCTGGCAGCGCGTAGTGACGGGTGTGAACCTGAACGGCTTCATGGCCGACCGTTGGAGAGTCACCCCTACCGGGGCAGGTACTTACGTCGTCGGCAATGCTCAGGTAGGCTCCCAGCGGGCGCACCGCTTCACTGTGTCCTCCCTCGGTTCCCTGTCCCAGCTTCAGTTGGAACAGCGTGTAGAGGATCTGGAGGCCGTGCTGGACAACTCCTACGTGACCGTGAGCTTCTATGGCCGCATGGGTGCTGGATCTGGCGTTCAGGTTCGTGCTGCCCTTGTGCAGAACTGCGGTGTAGGTGGCTCCGCTGCCGTCACTACCACCTCCCCGGCGCAGACCATGGCGGCTACAACTACCCTAACCCGGTACGAGTTCCGCATCCAGCTCCCAACGAACGCAGGCAAGACCGTAGGCGCCAACTCGTACCTCGGCGTGCAGTTGCTGTTCACAGGCTTGGCTACTGGTCAAGTCATTGACGTGCTGAATGTCAAGGCCGAAGAAGGCTTCCGGGCCACCCCGTACGAGCGCCCTCTTATCGGTGACGAGCTGCTGCGCTGCCAGCGGTACTTCTGGCGCACCCAGCCTATCGACTGGAACTGGTCTGGGTATGCGGCAGACGCAATCGCGTCTCGGTACACCAAGTTGCCTGTAGCTATGCGTGGCGGTGCGGTTCTCACCACGAACGCTAACAGTCCGTCCGCGTCCGGTGGTGCTGACCTGAACCGGTTGAGTATCGCACTGTCGGCGTATCAAGACGAGATTCGTTGGATCTGCTACAGCACAGTTGCGAACACTAGCATCTACATCGGGTTCAACTCCAACAACTACATCCAAGTTGAGGCGGAACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7c70fd6feb8bf7a05f73bde5d37446ec757b37926669bdc3f12593bd60091137
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8045
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Presentation of Three Novel Tailed Phages Targeting Multiple Strains of Pseudomonas syringae Jorgensen,J.B., Djurhuus,A.M., Carstens,A.B., Kot,W., Neve,H., Morris,C.E. and Hansen,L.H. 2020 — GenBank