Protein

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Genbank accession
QDH50713.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,55
Protein sequence
MSAINVNSITGRTGSHGPVLTGVTTISGDLHVGSGLSVTGISTLSNTIVGGGLSVTGISTLSNTVVGGATTELVVGGDARITGILTIGTGSVTIDGTSGSSSITGVTTAGIGSVYGVDSINDLGYPTAGPLSNRNLIINGAMVASQRGTSHTSQHTVNNYGIDRWQVVCPNTSAVLVHSQETTGGPDGFKNWLKISPSTADTDIAANDYSSVQQKIEGYNFAPARYGFADAKNVTVSFKFKTNKAGTYCMCHRNAAADRNYLHEFTPVADGSWQTITYTVTPDTSGTWDTTNAIGWRFELFLANGTANQSNTTDTWFGGQYFHATSNQVNFLDSTSNELGITGVQVELGTRATPFEHRSYGDELEKCRRYFQHSFTGAPSTTNTDHTGIIHAGGGNTSSTTGFLGTAMVRFSPNMRTTPTTVAYDLASPRNINKCHRHIYGVAGTNNQSITMSDINDKGFAVRSDSGVSATGIIFHYTAEAEL
Physico‐chemical
properties
protein length:483 AA
molecular weight: 50804,31010 Da
isoelectric point:6,08145
aromaticity:0,08075
hydropathy:-0,21677

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B43
[NCBI] 		2484638 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH50713.1 [NCBI]
Genbank nucleotide accession
MN018232.1 [NCBI]
CDS location
range 203655 -> 205106
strand +
CDS
ATGTCAGCAATTAATGTAAATTCTATTACAGGTAGGACTGGTTCTCACGGACCAGTGCTGACGGGTGTGACTACCATCTCGGGTGACTTACATGTCGGAAGTGGTTTATCTGTAACAGGTATATCAACATTAAGTAATACAATAGTTGGTGGTGGTTTATCTGTAACAGGTATATCAACATTAAGTAATACAGTAGTTGGTGGTGCTACAACAGAGTTGGTAGTTGGTGGTGATGCTAGAATCACTGGTATTCTAACAATTGGTACTGGTTCAGTTACGATTGACGGAACATCAGGTAGTTCAAGTATCACTGGGGTAACAACCGCAGGTATTGGTTCTGTTTATGGTGTTGATAGTATTAATGACTTAGGTTATCCTACTGCTGGACCATTAAGTAATCGCAACCTGATTATCAATGGGGCGATGGTAGCTTCTCAAAGAGGCACAAGTCACACCTCTCAACATACCGTTAATAACTATGGTATAGACCGTTGGCAGGTAGTTTGTCCAAATACATCGGCAGTTTTAGTACATAGCCAAGAAACTACTGGTGGTCCTGATGGATTTAAAAATTGGCTAAAGATTTCACCATCAACTGCAGATACCGATATTGCTGCAAATGATTACAGCAGCGTTCAGCAAAAAATTGAAGGGTATAATTTTGCTCCTGCAAGATACGGATTTGCTGATGCAAAAAATGTAACAGTTAGTTTTAAATTTAAGACTAACAAAGCTGGTACTTATTGTATGTGCCACAGGAATGCAGCGGCAGACAGAAACTATCTTCATGAATTTACGCCAGTTGCTGATGGGTCTTGGCAGACCATAACTTACACCGTGACCCCAGATACTTCTGGGACGTGGGATACTACAAATGCTATTGGTTGGCGTTTTGAATTATTTCTTGCAAATGGTACAGCCAATCAAAGCAATACAACAGATACTTGGTTTGGAGGGCAATATTTTCACGCAACCTCAAACCAAGTTAACTTCCTAGACAGCACGTCTAACGAGTTAGGTATTACTGGAGTCCAGGTGGAGTTAGGCACCAGAGCCACACCTTTTGAACATCGTTCTTATGGTGATGAGCTTGAGAAGTGTCGGAGATACTTCCAACATTCTTTTACTGGTGCCCCCAGCACGACTAACACTGATCACACTGGTATTATTCATGCTGGTGGAGGGAATACAAGTAGTACAACAGGTTTTCTTGGAACTGCAATGGTTCGATTTAGCCCAAACATGCGTACCACGCCAACCACAGTTGCTTACGATCTTGCTTCCCCAAGAAACATTAATAAATGTCATAGGCACATTTATGGCGTAGCTGGTACTAACAATCAAAGTATTACAATGTCAGATATTAACGATAAGGGATTTGCGGTACGATCAGATAGTGGTGTCAGTGCAACCGGCATTATTTTCCATTACACAGCAGAGGCAGAACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d64fa36c6503aec5b1e71dea8888baf8473c77b823c0f2787ad664e1e29bd40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7892
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization and genome sequencing of the novel cyanophage S-B43 from the Bohai Sea, China Wang,M. 2020-10 — GenBank