Protein

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Genbank accession
UYM28902.1 [GenBank]
Protein name
hinge connector of long tail fiber proximal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSNIMAGFGEGFVETQIMSENNAVRYKLSVAAGLKSSAPSNEYILLQDKPLGEQGNSPGMNVREINLSTNTVISRKIFDFKNGELVGANKSFVDYMTSLVAKDNTIIVLSTGDRLYSSETVDNWFKSVSSPSWPGTWMCSKYPCSYVAFYSVHKKKIIQEHTTYSDGVLRDEDVRAQLEVVYDKFDDIGATGFVKRAIEEVAEASSDTEYEFKRYPSGAPIIALMKDYSITPGSKLKASFELFADKALLDSGQSTRLNFRWFKGSTILTSQANEVPIGQSDRWIKYERYIDVPATADGFTVIAARYPRQDTSVGVGAVRNLILLEVSRQDEAISRSAEFGVNGIRMNKAIDGQNSELLILPDTKDDPSGEIRSAEFREYAKTV
Physico‐chemical
properties
protein length:383 AA
molecular weight: 42546,37440 Da
isoelectric point:5,22569
aromaticity:0,09922
hydropathy:-0,32689

Domains

Domains [InterPro]
DC_0912
STR
1–383
DC_0912
PS52031
LEC
22–197
PS52031
UYM28902.1
1 383
Architecture
STR
STR 1-383
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYM28902.1
1 383
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,3719
Central domain 175 372 199 0,3215
C-terminal 373 383 10 0,4489
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-372
C-terminal
373-383

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SspM_LC53
[NCBI] 		2989509 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYM28902.1 [NCBI]
Genbank nucleotide accession
OP617331 [NCBI]
CDS location
range 156958 -> 158109
strand +
CDS
ATGTCTAATATTATGGCAGGTTTTGGCGAAGGATTTGTCGAAACTCAAATTATGTCAGAAAATAATGCCGTAAGATATAAACTCTCAGTAGCTGCCGGGCTGAAAAGCTCGGCTCCTTCAAATGAATATATTTTACTGCAGGATAAGCCATTAGGAGAACAAGGAAATTCTCCTGGGATGAATGTTCGCGAAATAAATCTTTCCACCAATACAGTTATCTCCCGTAAAATATTTGATTTCAAAAATGGCGAACTTGTAGGAGCTAATAAAAGCTTTGTCGATTATATGACTTCACTTGTGGCTAAAGATAATACAATTATTGTACTAAGCACTGGGGATAGACTCTATTCTAGCGAAACTGTTGATAATTGGTTCAAATCTGTTTCATCTCCTAGTTGGCCTGGCACATGGATGTGCTCTAAATATCCGTGTTCTTACGTTGCGTTTTATTCAGTTCATAAGAAAAAAATCATACAAGAACACACAACTTATTCTGACGGGGTCCTTCGTGATGAAGATGTAAGAGCTCAATTAGAAGTAGTGTATGATAAGTTTGATGATATTGGAGCCACTGGATTTGTTAAAAGAGCTATAGAAGAAGTTGCCGAAGCTTCTAGCGACACAGAGTATGAATTTAAACGATATCCTTCTGGAGCACCTATCATTGCTTTGATGAAGGATTATTCTATTACCCCAGGTTCAAAGCTTAAGGCTTCTTTTGAGCTATTTGCAGATAAAGCGCTTCTAGATTCAGGGCAATCCACTAGATTAAATTTTAGATGGTTTAAAGGAAGTACGATTCTGACGTCTCAGGCTAACGAGGTGCCCATCGGACAATCAGATAGATGGATAAAGTACGAACGATATATAGACGTTCCTGCTACTGCTGACGGCTTCACGGTAATTGCTGCTCGATATCCTCGTCAAGATACTAGCGTAGGCGTAGGAGCTGTAAGAAATTTAATCCTTCTTGAAGTTTCTAGACAAGATGAAGCAATTAGTAGATCAGCTGAATTTGGTGTAAATGGTATAAGAATGAATAAAGCTATAGATGGACAGAATAGTGAACTTCTTATTCTTCCAGACACTAAAGATGATCCATCCGGTGAAATTAGATCTGCTGAATTTAGAGAATACGCGAAAACTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e77ddd00bb4de153d3f433680ffce20c90e9ba13b5ae01de675799f17ebc9cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6383
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
An OmpW-dependent T4-like phage infects Serratia sp. ATCC 39006 Mahler,M., Malone,L.M., van den Berg,D.F., Smith,L.M., Brouns,S.J.J. and Fineran,P.C. — — GenBank