Protein

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Genbank accession
UXD81501.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTEHFITLSTTEPNNNIGIVKLRHADVNSQAIVAQIVENGQPKSFEGLQPFFCLMAQEITGQGVAEESIVSFDASKGTLSYIVSDNALQMVGRNEAYFSFRKQKGGRWIEQFSTRTFHYIVEKSIYSQPFKDSNYWWTFKELNRIFNQYIENGKKSWEEFVNQNKEIIESVDPGGLVLSELIRSRNPAGANAPYKDLPERLDRQIGLNSDFRAFEIENSFMKRVFNEFTERGINPEWYTLVSKNDTEKVQLAINDAINTKKELVLTKDYYIDGIVINKSLTIRGNGHALYANKQGVEKFISIISTSQKSEETTTIIQIYNLKVINKSNCIYGLFNDSSILIMHHCLVEGFVTANVVGKPNSGGSFGNLNIDYLDSNLSENGILSLGATDHKIFGYMGYNCMTHINGLGGNSYLFHSHGWNYNTPTKNWINGSKFVAVKDSCIMSNIYADTLEIAVDLTAANDLVWALIAISNLGYFINKSTYPDQTETNGVPTPKIFTDLDSFKGQLNVTGMNVDFNGWLDKNSQRPKIASGKIDTERMKFGGLNANGLDDNHGINLKKSQEINDYLSYDSTYLNKDSFKSLSQLGKTKMFVSFSLKKQAPSGVLINEITLKPTNITLSEVNIVTCDAIGWIADGTVYKLSARVSGDKIKIYNTSGQTITYGVEINVEVESYLC
Physico‐chemical
properties
protein length:674 AA
molecular weight: 75499,31840 Da
isoelectric point:5,87496
aromaticity:0,10534
hydropathy:-0,30475

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
1–126
G3DSA:2.60.40.3350 G3DSA:6.10.250.1350 DC_0953
G3DSA:2.60.40.3350
ATT
1–125
G3DSA:2.60.40.3350 G3DSA:6.10.250.1350
IPR018913
ATT
3–148
IPR018913
UXD81501.1
1 674
Architecture
ATT
STR
ATT 1-193 | STR 223-672 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UXD81501.1
1 674
Domain Start End Length (AA) Confidence
N-terminal 1 245 245 0,9965
Central domain 246 552 308 0,9855
C-terminal 553 674 121 0,9746
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-245
Central
246-552
C-terminal
553-674

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage D4840
[NCBI] 		2979362 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus cremoris
[NCBI] 		1359 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UXD81501.1 [NCBI]
Genbank nucleotide accession
OP323076 [NCBI]
CDS location
range 16701 -> 18725
strand +
CDS
ATGACAGAACATTTTATAACACTGTCCACCACAGAGCCTAATAACAATATTGGCATTGTTAAGCTAAGACATGCGGATGTCAATAGTCAAGCCATTGTTGCTCAAATCGTAGAGAACGGTCAGCCCAAGAGTTTTGAGGGACTCCAACCGTTCTTTTGTTTAATGGCACAAGAAATTACTGGTCAAGGGGTGGCAGAAGAAAGCATTGTTTCATTTGATGCATCCAAAGGAACACTGAGCTATATTGTCAGTGATAATGCTTTGCAAATGGTGGGACGAAATGAAGCATATTTTAGCTTTAGAAAACAAAAAGGCGGGCGGTGGATTGAGCAGTTTTCCACTCGGACATTTCACTATATTGTTGAGAAATCTATTTATTCGCAACCCTTCAAAGACTCAAACTATTGGTGGACTTTCAAAGAGTTAAATCGAATCTTCAACCAATATATTGAAAATGGTAAAAAGAGCTGGGAAGAGTTTGTTAATCAAAACAAAGAAATAATAGAATCAGTTGACCCGGGAGGACTAGTATTAAGCGAATTAATACGTAGCAGGAACCCAGCAGGAGCAAATGCACCGTACAAAGATTTACCGGAAAGATTAGATAGACAAATTGGTTTAAACAGTGATTTTCGTGCATTTGAAATAGAAAACAGTTTTATGAAACGAGTATTTAATGAATTTACCGAACGAGGTATTAATCCAGAATGGTACACTTTAGTGTCAAAGAATGATACTGAAAAAGTCCAACTAGCTATTAATGATGCGATAAATACAAAAAAAGAACTTGTTTTAACAAAAGATTATTATATTGATGGTATTGTGATTAATAAAAGCCTTACTATTAGAGGGAATGGTCATGCATTATATGCTAATAAACAAGGCGTTGAAAAGTTTATTAGTATTATATCAACGTCTCAAAAATCAGAAGAAACAACTACAATTATACAAATATATAACTTAAAAGTGATTAATAAATCAAATTGTATTTATGGTTTGTTTAATGATTCAAGTATTTTAATTATGCATCATTGTTTGGTTGAAGGTTTTGTTACAGCGAACGTTGTTGGAAAACCGAACTCAGGTGGTAGTTTTGGGAACTTAAACATAGATTATCTAGACTCTAATTTGTCTGAAAATGGTATTCTATCGCTAGGAGCAACTGACCACAAAATCTTTGGTTACATGGGATATAACTGTATGACGCATATAAATGGTTTAGGAGGAAATTCCTATCTTTTTCATTCTCATGGTTGGAATTACAATACTCCGACAAAAAATTGGATAAACGGAAGTAAATTTGTTGCAGTCAAAGATAGTTGTATAATGTCTAATATTTATGCTGATACTCTCGAGATTGCAGTTGATTTAACAGCTGCTAATGATCTAGTCTGGGCGCTGATAGCGATTAGTAATTTAGGCTATTTTATAAATAAGTCTACTTATCCAGATCAGACAGAAACAAACGGAGTGCCAACACCGAAAATATTTACAGATTTAGATTCATTTAAAGGTCAGCTAAATGTTACAGGTATGAACGTTGATTTTAATGGTTGGCTAGATAAAAATAGCCAAAGACCTAAAATCGCAAGTGGTAAAATCGATACGGAAAGAATGAAGTTCGGTGGATTGAATGCAAACGGTTTGGACGACAACCACGGTATTAACTTAAAAAAATCTCAAGAGATAAACGATTATTTAAGTTATGATTCAACCTACTTAAACAAAGATAGTTTTAAATCTTTATCGCAACTGGGAAAAACAAAAATGTTTGTATCGTTTTCATTGAAAAAACAAGCACCGAGTGGCGTATTAATTAATGAAATTACCTTAAAACCCACTAATATAACGTTATCTGAGGTAAACATTGTCACTTGTGATGCGATCGGCTGGATAGCAGATGGCACAGTGTACAAACTAAGCGCAAGAGTATCTGGTGATAAGATAAAAATCTACAATACATCTGGGCAGACGATAACGTATGGCGTAGAGATTAACGTGGAAGTTGAATCGTATTTATGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae55efbedeb8f90ad583798abfc017a139c6193912e5ec58492141fecc23e167
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7164
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Host-encoded, cell surface-associated exopolysaccharide required for adsorption and infection by lactococcal P335 phage subtypes Millen,A.M., Romero,D.A., Horvath,P., Magill,D. and Simdon,L.B. 2022 — GenBank