Protein

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Genbank accession
AUR82220.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MARDSLSDLINRISNDIQENTSGNITATLLNELLDYLTNNLYLPTDATVTVNTTAGVKSFTFGSGLTVTVDGVAGTAEISVTDNTPVIIFGEMNVTTDETNTVTFGAGQTTADDTLLPITVGTTYFEVPGYAGGIQDGLVYDAGNGGLRAAVAGTYHFDGWLSCRHTVNNSTVGVVFGVKRGGSIIATSSRPTPAKMPNAGDIGLISGTGLVTLEIDDVVVPLVATDSQGDVTINNSTLVGKLLKAS
Physico‐chemical
properties
protein length:247 AA
molecular weight: 25498,12430 Da
isoelectric point:4,20634
aromaticity:0,05668
hydropathy:0,14372

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.022.O._10N.286.45.A10
[NCBI] 		1881418 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR82220.1 [NCBI]
Genbank nucleotide accession
MG592406.1 [NCBI]
CDS location
range 3372 -> 4115
strand +
CDS
ATGGCACGCGATTCACTCTCAGATCTGATCAACCGTATCAGTAATGACATTCAGGAAAACACGTCAGGTAATATCACCGCGACGCTGTTAAACGAACTTCTAGACTACCTCACGAATAACTTATACCTACCGACTGACGCAACCGTAACGGTTAACACTACCGCGGGGGTTAAATCCTTTACGTTCGGTAGCGGACTTACCGTTACGGTCGACGGTGTAGCAGGTACGGCTGAAATCAGCGTAACGGACAATACGCCTGTGATCATATTCGGTGAAATGAACGTTACGACAGACGAGACAAACACCGTAACGTTCGGTGCGGGTCAGACGACTGCGGATGATACACTCCTTCCTATCACTGTAGGTACGACTTACTTCGAGGTTCCGGGCTATGCGGGTGGTATTCAAGACGGTCTAGTCTATGACGCGGGTAACGGTGGTCTACGCGCTGCGGTTGCAGGTACTTACCATTTCGACGGTTGGCTATCATGCCGACACACTGTGAACAACTCGACGGTAGGTGTCGTATTTGGCGTTAAGCGTGGCGGTTCTATTATCGCCACGTCGTCACGCCCCACACCTGCTAAGATGCCTAACGCCGGCGATATCGGTCTAATCAGCGGTACAGGTTTAGTCACCTTAGAAATTGACGATGTGGTAGTACCTCTTGTCGCAACGGATAGCCAAGGCGACGTAACGATTAATAACTCGACGCTTGTTGGTAAGTTACTTAAAGCGTCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e637a599111a4f3545ee7ad5b4f9720125f0780d8ba9e3d42e0541ae645da08d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7348
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank