Protein

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Genbank accession
WPJ67458.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGTKPLIHLINRDSVEQYYVVFTGQAVRVFDLNGKEYTVKGDLSYVKVGNPRDDLRMVTVADYTFIVNRNMVVRADKTPLYTLKENGDCLINVRGGQYGRTLAFTINNVRIEYKIAQGDKPEHVQETDAQWLVKKLAGLARAHGSFKDWKFNEGSGFIHVIAPGNSQINQLSTEDGYANQLMNAVMHTSQSFSKLPIEAPNGYTVKIVGDTSKTSDMFYVQYDNVKKVWKEVAGWGVEKGLNGDTMPHALVRQSDGSFAMQVLPWAQRSCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSASGILSPKSVELNLTTEFDVSDRARPYGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFISVLSANAPSKIFLYKFLYLNEEIAQQAWSHWELGSNVTVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFDSEPYRLYIDNKIKYVIPKGAYNDDTYTTTIKPVDIYGMKYWNGKFYIVASDGLVSWFEPPRGGWPNGVPVLSMSGNREGETIYIGLAIDFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFRYDMAGARLGSNALRAGGLNVGTGQFRFPVAGNAQLNEVRIISDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:792 AA
molecular weight: 88376,73540 Da
isoelectric point:7,18709
aromaticity:0,11237
hydropathy:-0,28245

Domains

Domains [InterPro]
IPR058003
TTP
1–792
IPR058003
WPJ67458.1
1 792
Architecture
TTP
TTP 1-792
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ67458.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9940
Central domain 141 344 205 0,1197
C-terminal 345 792 447 0,2390
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-344
C-terminal
345-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Carena
[NCBI] 		3093946 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ67458.1 [NCBI]
Genbank nucleotide accession
OR769031 [NCBI]
CDS location
range 26915 -> 29293
strand +
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAGGGCGGTATCAGTCAACAGCCGAACATCTTAAGGTTCCCCGAACAGGGTTCCGAACAGATTAACGGCTGGTCTTCGGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTACAAAACCACTCATCCACTTAATCAACCGTGATAGCGTAGAACAGTATTACGTTGTGTTCACAGGACAGGCAGTCCGAGTGTTCGACCTAAATGGCAAAGAGTACACAGTGAAGGGTGACTTGAGTTACGTGAAGGTAGGGAACCCGCGTGATGACCTACGAATGGTGACGGTTGCTGACTATACGTTTATCGTTAACCGAAACATGGTGGTTCGTGCCGATAAGACACCGCTCTATACTCTAAAAGAGAACGGAGACTGTTTGATTAACGTTCGTGGTGGACAATATGGGCGCACCTTGGCGTTCACAATAAACAACGTCCGCATTGAGTACAAGATTGCACAAGGTGACAAGCCTGAACACGTGCAAGAGACCGATGCGCAGTGGCTCGTTAAGAAACTGGCAGGTCTTGCTCGTGCTCACGGTTCCTTCAAGGACTGGAAGTTCAACGAAGGGTCTGGCTTCATCCACGTCATCGCTCCGGGTAACAGTCAGATTAACCAGTTGTCCACTGAGGATGGTTATGCTAACCAGTTGATGAATGCTGTAATGCACACAAGCCAGTCATTCAGTAAGTTGCCAATCGAGGCTCCTAATGGATACACTGTGAAGATTGTAGGTGACACCTCTAAGACTTCCGATATGTTCTATGTCCAGTATGACAACGTGAAGAAAGTCTGGAAGGAAGTCGCCGGATGGGGAGTTGAGAAGGGTCTCAATGGTGACACTATGCCACATGCTTTGGTTCGTCAATCAGACGGCTCCTTCGCTATGCAGGTTCTACCGTGGGCACAGCGCTCATGTGGGGACATGGATACTAACCCGACTCCTTCTATCGTAGACCAGAAGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTAGCTGGTGAGAACATTGTGATGTCTCGTACCTCCAAGTATTTCTCGCTGTTCCCTGCATCCGTGGCTAACCTGTCAGATGATGACCCGATTGATGTGGCTGTATCCCACAACCGTATCTCAATCCTGAAGTATGCCGTACCGTTCTCTGAAGAGTTGCTGCTATGGTCTGACCAAGCACAGTTCGTTCTGTCTGCCTCTGGTATCCTCTCACCGAAGTCTGTAGAGTTGAACCTTACGACTGAGTTCGATGTATCCGACCGTGCGCGCCCTTATGGTGTTGGTCGTGGTGTATACTTTGCGTCACCTCGTGCATCTTATACATCACTGAACCGCTACTATGCTGTACAGGACGTAAGTTCAGTTAAGTCCGCTGAGGATATGAGTGCTCACGTTCCAAGCTACATCCCCAACGGTGTGTTCTCCATTCGTGGGTCTGGTACTGAGAACTTTATCTCTGTGCTCTCCGCGAACGCCCCTAGTAAAATCTTCCTGTACAAATTCCTGTACCTAAACGAAGAGATTGCACAACAGGCGTGGTCACATTGGGAACTTGGAAGTAACGTAACGGTTCTGGCTTGTGACTCTATCGGCTCAACTATGTACCTTGTGTTGCGCAATCAGTCACACACTTGGATGTGCCGAGCACACTTTACGAAGAACAGCATTGACTTCGATAGCGAGCCTTACCGCTTGTATATTGACAACAAGATAAAGTATGTGATTCCTAAAGGTGCCTACAACGATGACACTTACACGACCACTATCAAGCCTGTGGACATCTACGGGATGAAGTATTGGAATGGTAAGTTCTACATCGTAGCCTCTGATGGTCTGGTATCGTGGTTCGAGCCACCTCGTGGTGGATGGCCTAACGGTGTCCCTGTGTTGTCAATGAGTGGGAACCGAGAGGGTGAGACTATTTACATTGGGTTGGCTATAGACTTCCGTTATGTGTTCTCTAAGTTCCTCATTAAGAAGACTGCCGATGATGGTTCAACAGCTACCGAGGATATTGGGCGCTTGCAGCTTCGCCGTGCGTGGGTCAACTATGAGGACTCCGGTGCATTCACTGTGGAGGTTGAGAACACCTCTCGCCTCTTCAGGTACGACATGGCGGGTGCCCGCTTGGGTTCCAATGCTCTACGTGCTGGTGGACTTAATGTTGGTACTGGTCAGTTCCGCTTCCCGGTTGCTGGCAACGCACAGTTGAACGAAGTAAGGATTATCTCTGACCACACTACACCACTTAACGTGATTGGTTGTGGCTGGGAAGGTAACTACCTACGTCGCTCTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd4736b44441917a91097ab504a89841880e86e3d84ccbb5714f7d17b5737649
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3114
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Escherichia phage Carena and JoYop Addablah,A., Kakou Ngazoa,S., Adioumani,E., Gunathilake,D., Tremblay,D. and Moineau,S. 2024-03-12 — GenBank