Protein

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Genbank accession
CCW03256.1 [GenBank]
Protein name
putative phage tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MRKLTNFKFFYNTPFTDYQNTIHFNSNKERDDYFLNGRHFKSLDYSKQPYNFIRDRMEINVDMQWHDAQGINYMTFLSDFEDRRYYAFVNQIEYVNDVVVKIYFVIDTIMTYTQGNVLEQLSNVNIERQHLSKRTYNYMLPMLRNNDDVLKVSNKNYVYNQMQQYLENLVLFQSSADLSKKFGTKKEPNLDTSKGTIYDNITSPVNLYVMEYGDFINFMDKMSAYPWITQNFQKVQMLPKDFINTKDLEDVKTSEKITGLKTLKQGGKSKEWSLNDLSLSFTKLQEMMLSKKDEFKHMIRNEYMTIEFYDWNGNTMLLDAGKISQKTGVKLRTKSIIGYHNEVRVYPVDYNSAENDRPILAKNKEILIDTGSFLNTNITFNSFAQVPILINNGILGQSQQANRQKNAESQLITNRIDNVLNGSDPKSRFYDAVSVASNLSPTALFGKFNEEYNFYKQQQAEYKDLALQPPSVTESEMGNAFQIANSINGLTMKISVPSPKEITFLQKYYMLFGFEVNDYNTFIEPINSMTICNYLKCTGTYTIRDIDPMLMEQLKAILESGVRFWHNDGSGNPMLQNPLNNKFREGV
Physico‐chemical
properties
protein length:587 AA
molecular weight: 68505,87610 Da
isoelectric point:6,44443
aromaticity:0,12606
hydropathy:-0,55707

Domains

Domains [InterPro]
IPR031772
TAS
3–115
IPR031772
DC_0080
STR
84–428
DC_0080
CCW03256.1
1 587
Architecture
TAS
STR
TAS 3-83 | STR 84-428 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PSa3
[NCBI] 		1319980 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCW03256.1 [NCBI]
Genbank nucleotide accession
HF937074 [NCBI]
CDS location
range 7735 -> 9498
strand -
CDS
ATGAGAAAATTAACAAATTTTAAGTTTTTCTATAACACACCGTTTACAGACTATCAAAATACAATTCATTTTAATAGTAATAAAGAACGTGATGATTATTTTTTAAACGGTCGTCATTTTAAATCGTTAGACTATTCAAAACAACCGTATAATTTTATTCGTGATAGAATGGAAATTAATGTTGATATGCAGTGGCATGACGCACAAGGGATTAACTATATGACGTTTTTATCAGATTTTGAGGACAGACGTTATTATGCATTTGTTAACCAAATCGAATACGTGAATGACGTTGTAGTTAAAATATATTTTGTGATTGATACCATTATGACATATACACAAGGGAATGTATTAGAGCAACTCTCAAACGTTAATATTGAACGACAACATTTATCAAAACGCACGTATAACTATATGTTGCCGATGTTACGTAACAATGATGATGTATTAAAAGTATCGAATAAAAACTATGTATATAATCAAATGCAACAGTATTTAGAAAATTTAGTTTTATTTCAATCAAGTGCTGATTTATCAAAAAAATTTGGTACAAAAAAAGAACCGAATTTGGATACGTCTAAGGGTACGATATATGACAATATCACATCACCAGTTAACTTATACGTCATGGAATATGGTGACTTTATTAATTTTATGGATAAAATGAGTGCTTATCCATGGATTACACAAAACTTTCAAAAGGTTCAAATGTTACCTAAAGACTTTATTAATACAAAAGATTTAGAGGACGTTAAGACAAGTGAAAAAATTACTGGATTAAAGACGTTAAAACAAGGTGGAAAATCAAAAGAATGGAGTTTAAACGATTTATCATTAAGTTTTACAAAGCTTCAAGAGATGATGTTATCTAAAAAAGATGAATTTAAACATATGATACGTAATGAGTATATGACAATTGAATTTTATGATTGGAATGGAAATACGATGTTACTGGACGCTGGTAAGATTTCGCAAAAAACAGGTGTTAAGTTACGTACAAAGTCAATCATTGGTTATCATAATGAAGTTCGAGTTTATCCAGTAGACTATAACAGCGCTGAAAACGATAGACCGATACTTGCTAAAAATAAAGAAATATTGATTGATACAGGTTCATTCTTAAATACAAATATAACATTTAATAGTTTTGCACAAGTACCAATATTAATTAATAATGGTATCTTAGGACAATCACAACAAGCAAATAGACAAAAGAATGCGGAAAGTCAATTAATTACAAATCGTATTGATAATGTATTAAATGGTAGCGACCCGAAATCACGCTTTTATGACGCTGTGAGTGTAGCAAGTAATTTAAGTCCGACAGCTTTATTTGGTAAGTTTAATGAAGAATATAATTTCTACAAACAACAACAAGCTGAGTATAAAGACTTAGCATTACAACCACCATCAGTGACAGAATCAGAAATGGGAAACGCGTTCCAAATTGCGAATAGCATTAATGGTTTAACGATGAAAATTAGTGTACCATCACCTAAAGAAATTACATTCTTACAAAAATATTATATGTTGTTTGGTTTTGAAGTAAATGATTATAATACATTTATTGAACCAATTAACAGTATGACTATATGCAACTACTTAAAATGTACAGGTACGTATACTATACGTGACATCGACCCGATGTTAATGGAGCAATTAAAAGCAATTTTAGAATCGGGTGTGAGATTTTGGCATAATGACGGTTCAGGTAATCCAATGTTACAAAATCCATTAAATAATAAATTTAGAGAGGGGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d2d39c90e6c25f816dda4f93d08e531f50f7691dcc65fb1102cdf4647040ea7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3936
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of MRSA phages with lytic activity against CC398 strains Kraushaar,B., Dinh Thanh,M., Reetz,J., Fetsch,A., Hammerl,J.A. and Hertwig,S. 2013-06-13 — GenBank