Protein

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Genbank accession
WGM50097.1 [GenBank]
Protein name
pre-neck appendage
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,87
Protein sequence
MLNINKLNPIDLNCSIFTVYDYTGLSMQEILCQFFSKINELIDSQNQVIDLTKWLVGQGLKEEVAKQLNQWLIDGTLSTIINETVFRDLNNKINSNIENIKNNKKEIDKLVTVWGNLKCFNVVDFGGVGDGETNNNKAFENAINSCVENNVRGLLIPTGKFYITEGINTKGVKIIGMGDPYIPFLEWEYTRPNSKLDEYKKYLNKCRGSIITSDKNINIFTNGLYAENIGIFGNRRALTQNGIGQMDGGFCNWIEIEKVKIHGCGNCGINAEYGLITPIINQCWMYQNGNNGIRIGKNKGTYTGETNALIIEKCFINRNESHGIYLDVKGRAYTIKNNDLEQNGEMSDPLRNNKGTDYNDIVYGCYMKVEGEGGFTSGSIDFSNNYSEETLGLLYLESPDNKICQGVKFESNMWRPYNQELYSNGLLLKGWIEGIKIGNNNMYGKHKVRVINANTYGIETDTDITNPVYKNKNISIEKHYDYNGTMVDFRSTGRVEKYSIENMIQSASYDGSTYTNVYLNKPSVPYELQEDGQGNKLIGTTFLTSDGTSIGLVVDFSWTHGLFKIRKDRTSLIKTGNAKFMENGGFTTINGGNTPVKIYIDHDNEIVIL
Physico‐chemical
properties
protein length:609 AA
molecular weight: 68623,66850 Da
isoelectric point:5,56490
aromaticity:0,10181
hydropathy:-0,44959

Domains

Domains [InterPro]
DC_0396
ATT
1–180
DC_0396 DC_0525
Coil
Unmapped
90–110
Coil IPR011050
IPR012334
STR
119–547
IPR012334
IPR024535
ENZ
120–342
IPR024535
WGM50097.1
1 609
Architecture
ATT
STR
RBD
ATT 1-180 | STR 181-547 | RBD 548-609
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGM50097.1
1 609
Domain Start End Length (AA) Confidence
N-terminal 1 134 134 0,9863
Central domain 135 502 369 0,9849
C-terminal 503 609 106 0,9099
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-134
Central
135-502
C-terminal
503-609

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage cpp
[NCBI] 		3042444 Uroviricota > Caudoviricetes > Guelinviridae > Gregsiragusavirus > Gregsiragusavirus cpp
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGM50097.1 [NCBI]
Genbank nucleotide accession
OQ737697 [NCBI]
CDS location
range 2251 -> 4080
strand -
CDS
ATGTTAAATATAAATAAATTAAATCCTATTGACCTTAATTGTAGCATCTTTACCGTTTATGATTACACAGGTTTATCCATGCAAGAAATTTTATGTCAATTCTTTAGTAAAATAAATGAATTAATTGACTCACAAAATCAAGTTATAGATTTAACAAAATGGTTAGTTGGACAAGGATTAAAAGAAGAAGTAGCCAAACAACTTAACCAATGGTTAATTGATGGTACTTTATCAACAATAATAAATGAAACAGTATTCAGAGATTTAAATAATAAAATTAACTCTAATATAGAAAATATTAAAAACAATAAAAAAGAAATAGATAAACTAGTAACAGTTTGGGGTAACCTTAAATGTTTTAATGTTGTTGATTTTGGGGGCGTTGGTGATGGTGAAACTAACAACAATAAAGCCTTTGAAAATGCTATAAATTCATGTGTTGAAAACAATGTTCGTGGTTTGTTAATTCCTACTGGAAAATTTTATATTACAGAGGGTATTAACACAAAGGGTGTAAAAATCATAGGAATGGGTGACCCCTATATTCCATTTTTAGAATGGGAATATACAAGACCAAACTCAAAATTAGACGAATATAAAAAATATTTAAATAAGTGTCGTGGTAGTATAATAACATCAGATAAAAATATTAATATATTTACTAATGGTCTATACGCTGAAAATATAGGTATTTTTGGGAATAGGAGAGCATTAACTCAAAATGGTATCGGTCAAATGGACGGAGGTTTTTGTAACTGGATTGAAATAGAAAAAGTTAAAATCCATGGGTGTGGAAATTGTGGAATTAATGCAGAATATGGATTAATAACCCCTATAATAAATCAATGTTGGATGTATCAAAATGGTAACAATGGTATAAGAATTGGTAAAAACAAAGGAACTTACACAGGTGAAACAAACGCTTTAATAATAGAAAAATGCTTTATTAATAGAAATGAAAGCCACGGTATTTACTTGGATGTTAAAGGTAGAGCATATACTATTAAAAATAATGACTTAGAGCAAAATGGAGAAATGAGTGACCCATTGAGAAATAATAAAGGTACTGATTATAATGATATAGTTTATGGTTGTTATATGAAGGTTGAGGGTGAAGGTGGTTTCACTAGTGGGTCAATAGATTTTAGTAATAACTATTCAGAGGAAACCCTAGGTTTATTATACTTAGAAAGTCCCGATAATAAAATATGTCAAGGTGTAAAATTTGAATCCAATATGTGGCGACCTTATAATCAAGAATTATATTCAAATGGTTTACTACTAAAAGGTTGGATTGAAGGCATTAAAATTGGTAATAATAATATGTACGGTAAGCATAAAGTGAGAGTTATTAACGCAAATACTTATGGTATAGAAACTGACACAGATATAACAAACCCAGTATATAAAAATAAAAATATATCTATTGAAAAACATTATGACTATAATGGTACAATGGTTGACTTTAGAAGTACTGGTAGAGTTGAAAAATATTCTATTGAAAATATGATACAATCAGCATCTTATGATGGTAGCACATACACCAATGTATATTTAAATAAACCTAGCGTTCCGTATGAATTACAAGAAGACGGACAAGGTAATAAATTAATAGGAACAACGTTTTTAACATCAGACGGTACAAGTATTGGTTTGGTTGTTGACTTTTCATGGACTCATGGATTATTTAAGATAAGAAAAGATAGAACATCATTAATAAAAACTGGTAATGCAAAGTTTATGGAGAATGGTGGTTTCACAACAATAAATGGAGGTAATACACCTGTAAAAATCTATATTGACCATGACAATGAAATAGTAATTTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7d78de4b2203a681b2bc4bdfdc40c262c2bdd7742e0d6bb62d27cf0f55da5f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6727
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50