Protein

View in Explore
Genbank accession
XCO41751.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRSSTENKAPSADIVARGEIALNTHGRTLAIYTKDENDAIVQLAGKGVPFLDTSGTLNVDGTTTLKDNVTVAPNKSISFETTDLSGEITRHIVGKCATNDGWYIGAGGTSNNGILEIGTIDDGVETIQIVQRGAGNIEARKLVLLDNTGSTTLPGDLRLTTNKTVKISNGSTLTLEMGVGANDAYIKNLRGSGVLQLTNDSNLTFRNYQVYYAMGGKGPGKDGTLLTKVENNRQAWQYTISASTATTPRWVKIATIKHPRMASAQLDLMIAGGIDSGHGRHYVDFITLSGRNLTSWSPNSLDNWVEWRRIGSPSSGNVPVYYVDKNDSATNAEASFDLYAKVPRYANDLFVTVLNTSGYNGQESGSVVIYESGQDTGDTGPSGSIPVSMKQIFDSLSKPDFNDTTGILPINRGGTGGTSSAAARNNLGLGTAAIRDVGESTGNLLENGAYGLGGNGGKSINDIVSNADMLNRLKAYGGTFWRGVTKSGVSVQNGLYSHGSGIFMNAGDTMSAINIDYASAKVRVYAANNSGLAAGNVNYNELYGTANKPSKADVGLGNLTNDTQVKKAGDTMTGDLTVPNLHASGTGTASVYVNAGTGNAHVWFRTDGNERGVIWATPNTTDLGQINIRAKTTAGVSAGDFSFRSDGRLDVPVAVKIGGAAMLTKDGNITSGSMFGGNLNNYLTSIKNDITAGDSKQVSKTGDTMTGNLTINANLKVENPNGTFVDLGSENSDKYSRLTLARKAGDGAAVAMLKITPEGYVQFGYQTSVATPSPTKYIRVKPDGLDVEGDLVFNQTYSGAEEAIDISDKTVDLNSLVIKKSGLGTRQLYKCMSSGGGNNISNKPTSDGNFVLEVLSLRKVSETDWSCKQTFTTKNGGVEGTYIRYAQNGSWSAWKEVVAGVQPINLGGTGATSVDAARNNLGVGEWQSVAFGILGVNGVSNTDPAITFKNGAMVREAQDGSTGALIMSASSTAAAAAKYIAFRPFGDSSGTEIRVKANGSSEPLLEWSYGPGIRSNSSGAFVIYAKTGQALHLRPNGDSSNQATVIDQNGKMTVGGEFEAQNSKITGNLNVSEDNRMIVLGKNSDIGLVKKNGMPGKMAISKSNSFTVMASTNTNNQINPADTFNDIFKVDADGNQTVYGNAQINRQLSVSSVATVNGIINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTVTGRLIITGDQLKTTSLWVTGASALNGNLEVGGNVVSNNGIGSFVGAVDVKAPAADNGTTHLWFRHSNGGERGVIYMPKDNNTMMGLRAGGSEWQLDGPSGQLLGPGARWRVHADGNLQGDVYGGYITEYINNRFNQCAQWVRTGARWDIGPIGRPAPGKTVDPGWVMIGLNADSNEASQNMRIIAGRLQVWKPGVEWIDSAT
Physico‐chemical
properties
protein length:1428 AA
molecular weight: 150416,54600 Da
isoelectric point:6,68810
aromaticity:0,06793
hydropathy:-0,32213

Domains

Domains [InterPro]
DC_1942
ATT
4–615
DC_1942 cd19958 DC_0749
DC_0468
STR
484–1186
DC_0468
XCO41751.1
1 1428
Architecture
ATT
STR
RBD
ATT 4-615 | STR 616-1186 | RBD 1187-1416 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO41751.1
1 1428
Domain Start End Length (AA) Confidence
N-terminal 1 1094 1094 0,1699
Central domain 1095 1293 200 0,3739
C-terminal 1294 1428 134 0,8430
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1094
Central
1095-1293
C-terminal
1294-1428

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146055
[NCBI] 		3232234 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO41751.1 [NCBI]
Genbank nucleotide accession
PP889504.1 [NCBI]
CDS location
range 60731 -> 65017
strand +
CDS
ATGGCCGATCAGAACTTAAAACAAATACAATTTAAAAGAAGCAGTACAGAGAATAAAGCACCTAGTGCCGATATCGTAGCCCGTGGCGAAATCGCATTGAATACCCATGGGCGTACTCTTGCCATTTATACTAAAGATGAAAATGATGCCATAGTACAGCTCGCCGGTAAAGGCGTTCCATTTTTAGATACTTCCGGTACTCTCAATGTTGATGGAACTACTACATTAAAAGATAATGTTACTGTTGCTCCGAATAAATCGATCAGTTTTGAAACTACTGATTTAAGTGGTGAAATAACTCGACATATCGTAGGCAAATGCGCTACTAATGATGGCTGGTACATTGGTGCTGGTGGTACAAGCAATAACGGTATTCTTGAAATCGGTACTATCGACGATGGCGTTGAAACCATCCAGATTGTACAACGCGGTGCTGGTAATATTGAAGCCAGAAAATTAGTCTTGCTTGATAACACCGGTAGTACTACTCTTCCTGGTGATTTAAGATTAACTACTAATAAGACTGTAAAAATTTCAAACGGGTCCACTCTTACTTTAGAAATGGGCGTAGGTGCTAATGATGCTTACATTAAAAACTTGAGAGGCTCTGGCGTTCTTCAATTAACTAATGATAGCAATCTGACCTTCAGAAATTACCAGGTTTATTATGCTATGGGTGGAAAAGGTCCTGGTAAAGATGGTACTCTTCTGACTAAAGTAGAAAACAACCGCCAGGCCTGGCAGTATACTATTTCTGCTTCAACTGCCACAACCCCACGCTGGGTTAAAATAGCCACTATAAAACACCCTAGAATGGCCTCGGCCCAGTTGGATTTAATGATAGCTGGTGGCATTGATTCTGGGCATGGAAGACATTATGTAGATTTTATCACATTATCAGGTCGTAATTTAACATCTTGGAGCCCTAATAGCTTAGATAACTGGGTTGAATGGCGTAGAATAGGATCACCTTCCTCTGGAAACGTTCCTGTGTATTATGTCGATAAAAATGATTCTGCTACTAATGCAGAGGCTTCATTTGATTTGTATGCTAAGGTCCCTCGTTATGCTAACGACCTTTTTGTAACAGTATTGAATACCTCCGGATACAACGGCCAAGAATCTGGAAGTGTAGTTATCTACGAAAGCGGGCAAGATACTGGTGACACAGGGCCTTCCGGAAGCATTCCTGTTTCAATGAAGCAAATTTTTGACAGCTTATCAAAACCAGATTTCAACGATACCACCGGCATTCTTCCTATTAACCGAGGCGGTACTGGTGGTACTTCTTCTGCTGCTGCTCGTAATAACTTGGGTCTAGGTACGGCTGCTATTCGCGACGTCGGCGAATCCACCGGCAACCTTTTAGAAAACGGTGCTTACGGCTTGGGCGGTAACGGTGGCAAATCTATCAATGATATTGTCTCTAACGCGGATATGCTGAATCGTTTAAAAGCATACGGCGGTACTTTCTGGCGTGGTGTTACTAAATCTGGTGTTAGCGTTCAAAATGGCCTTTATAGCCACGGCTCCGGTATTTTTATGAATGCTGGTGATACCATGTCAGCTATTAATATCGACTATGCTAGTGCTAAAGTTCGTGTATATGCAGCTAACAACAGTGGTCTTGCTGCAGGAAATGTTAACTACAATGAACTTTACGGTACAGCAAATAAACCGTCTAAGGCTGACGTTGGGCTTGGTAATCTAACAAACGACACCCAGGTTAAGAAAGCCGGCGACACCATGACTGGTGATTTGACGGTTCCTAATTTACATGCTTCCGGTACCGGTACCGCATCAGTATATGTTAATGCCGGGACTGGGAATGCACATGTATGGTTTAGAACTGATGGTAATGAACGCGGTGTAATCTGGGCAACTCCGAATACTACGGATTTAGGTCAGATTAATATTCGTGCAAAAACCACAGCTGGTGTTTCTGCTGGTGATTTTAGCTTCCGTTCTGATGGCCGCCTTGATGTTCCTGTAGCAGTTAAAATTGGTGGAGCAGCAATGCTAACCAAAGACGGGAACATTACCTCCGGCTCGATGTTTGGTGGTAACCTTAACAACTATTTGACTTCTATTAAAAACGATATCACTGCTGGCGATAGTAAGCAAGTAAGTAAAACCGGTGACACAATGACCGGCAACTTGACTATTAACGCTAACTTAAAAGTCGAAAACCCTAACGGAACTTTTGTTGATTTAGGTTCAGAGAACTCAGACAAGTACAGTAGATTGACTCTTGCACGTAAAGCTGGTGATGGCGCGGCTGTAGCTATGCTTAAAATCACTCCTGAAGGATATGTGCAATTTGGTTATCAAACTTCAGTTGCTACTCCGTCTCCTACTAAGTATATCAGAGTTAAACCTGATGGTCTTGATGTAGAAGGGGATTTGGTTTTTAATCAGACATATAGCGGTGCTGAAGAAGCCATTGATATTTCTGATAAGACTGTTGACCTTAACAGCCTGGTTATTAAAAAATCCGGTTTAGGCACCCGTCAGCTGTATAAATGCATGTCATCTGGTGGCGGAAATAACATATCTAATAAACCTACATCTGACGGCAACTTTGTTCTTGAAGTTCTGTCTTTGCGTAAGGTTTCTGAAACTGACTGGTCATGTAAGCAGACCTTTACTACAAAGAACGGTGGCGTTGAAGGTACATATATTCGCTACGCGCAAAATGGTTCATGGTCCGCATGGAAAGAAGTTGTTGCGGGTGTTCAACCGATTAACTTAGGCGGCACCGGAGCAACCTCTGTAGATGCTGCTCGTAATAACCTCGGTGTTGGTGAATGGCAATCTGTGGCATTTGGTATATTGGGTGTCAACGGTGTTAGTAATACAGACCCAGCCATCACATTTAAAAATGGGGCTATGGTCCGTGAAGCCCAAGATGGTAGTACCGGTGCGTTAATAATGTCAGCTTCTTCTACAGCCGCTGCAGCCGCAAAATATATCGCTTTTCGACCCTTTGGTGATTCGTCTGGTACTGAGATTAGAGTAAAAGCCAACGGGTCCAGTGAGCCACTACTTGAGTGGTCTTATGGCCCAGGTATTCGTTCAAATTCATCTGGCGCTTTTGTTATCTACGCAAAAACTGGTCAGGCTCTTCATTTAAGACCTAATGGCGACAGCTCGAACCAAGCTACAGTTATCGATCAGAACGGTAAAATGACAGTCGGCGGCGAGTTCGAGGCGCAGAACTCGAAAATCACAGGCAACTTGAACGTCTCTGAAGATAACAGAATGATCGTTCTTGGTAAAAACTCTGATATAGGTTTAGTCAAGAAAAACGGTATGCCAGGTAAAATGGCTATCAGTAAATCTAACTCGTTTACTGTTATGGCATCAACCAATACCAACAACCAAATTAATCCTGCTGATACGTTTAACGACATATTCAAGGTGGATGCTGACGGAAACCAAACTGTTTATGGAAATGCCCAAATCAATAGACAGTTATCCGTTTCTAGTGTAGCAACTGTTAACGGTATTATTAATGCCAACGGCGGTATTATTGTTCCTACTACCAAGTATGTTCAAATTGCCGATGCTCCTACGCAGAATAACCAAGCCACTAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCCATTAGTAATGCTGGTGATACTTATCTTCCGTTAGCTGGTGGTACTGTAACTGGGCGGTTAATAATTACAGGCGATCAGTTAAAAACTACATCGCTCTGGGTTACTGGAGCTTCGGCTCTTAACGGTAATTTAGAAGTAGGTGGTAATGTTGTTAGTAATAATGGTATTGGTAGTTTTGTTGGTGCCGTAGACGTTAAAGCTCCTGCCGCAGATAACGGCACGACACATCTTTGGTTCCGACATTCTAATGGTGGCGAGCGTGGCGTTATCTATATGCCTAAAGACAACAATACCATGATGGGCCTGAGAGCTGGTGGCAGTGAATGGCAATTAGACGGTCCGTCAGGTCAACTGTTAGGTCCTGGCGCGCGCTGGAGAGTTCACGCAGACGGTAACTTACAGGGTGATGTTTACGGCGGATATATCACTGAATATATAAACAACAGGTTTAATCAGTGTGCTCAATGGGTCCGTACAGGAGCTCGATGGGACATCGGGCCAATCGGGCGCCCTGCACCAGGTAAAACGGTTGACCCTGGCTGGGTAATGATCGGTCTTAATGCTGATAGCAATGAAGCCAGCCAGAACATGCGGATAATCGCCGGACGGTTACAGGTATGGAAGCCGGGTGTTGAATGGATTGATTCTGCAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
80c17a0d78ff57e1010e838bcd658ec72c7d411cae66e6b27be99ebce9f9aa67
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5097
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank