Protein

View in Explore
Genbank accession
QIW88527.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,68
Protein sequence
MGEILLMAHSISFATLTEVLNLDVSTLPQGFAVVCLELKSWLIYDATASDATVSGQIFAPTAGAGRWFRSNNTTNKLNTITSVTTTSGTTVADFTSVEQVRVVFTQNSTINLQTTLRNGAGSLLLDRNSGSWTITGWDSRFRWGSNSVFAFSSNFAIIEFTCINNLIYIKSVTSY
Physico‐chemical
properties
protein length:175 AA
molecular weight: 19059,24440 Da
isoelectric point:5,70751
aromaticity:0,10857
hydropathy:0,19943

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW88527.1
1 175
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,7552
Central domain 30 164 136 0,0015
C-terminal 165 175 10 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-164
C-terminal
165-175

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudanabaena phage PA-SR01
[NCBI] 		2723892 No lineage information
Host Pseudanabaena sp.
[NCBI] 		1153 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW88527.1 [NCBI]
Genbank nucleotide accession
MT234670.1 [NCBI]
CDS location
range 90969 -> 91496
strand +
CDS
ATGGGGGAGATATTATTAATGGCTCATTCGATTAGTTTTGCTACGCTTACAGAAGTTCTTAATCTTGATGTCAGCACACTTCCTCAAGGTTTTGCAGTAGTCTGCCTTGAATTGAAGTCTTGGTTAATATATGATGCAACCGCTTCAGATGCAACTGTCTCAGGGCAGATATTTGCGCCTACTGCTGGTGCTGGTCGATGGTTCAGGTCAAACAATACAACGAACAAATTAAATACAATTACAAGTGTCACAACTACATCAGGTACAACTGTAGCTGACTTTACGAGCGTTGAGCAGGTTCGAGTAGTATTCACACAAAATAGCACCATTAATCTACAGACGACGCTGAGAAATGGTGCTGGTAGTTTGTTGTTGGATAGAAATAGTGGCAGTTGGACGATTACGGGGTGGGATTCTAGGTTCCGTTGGGGCAGCAACAGCGTCTTTGCATTCTCAAGTAATTTCGCGATAATCGAATTTACTTGTATCAACAACTTGATTTATATAAAATCAGTTACGAGTTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb465cbfed67d85c9b8fdf0e6b4a5e50e9c156748a0fdfd47ac6a37069bfaf13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8619
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of first freshwater cyanophage infecting Pseudanabaena Zhang,D. 2020-08-17 — GenBank