Protein

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Genbank accession
URP85457.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADLKLGTTLGGAGIWSASNLPLLPSGGQLTYKGWRVYTENDRPTAEDINALSMINGGTVAKNTTFSQNLVVGASLTSNSIQSNSVLTIQRSANPAEMIFHRPDITATPSSESWVLNLYAKDGLNRGMGSLIISARSDGGNKVYLRANKDGSPNTSLTLDSQTQQVTVEQGSFRVIGTSNLGLTNATSMAVSGAVTANTVTPSNWANHDERYITGIPRGMSGNSFGAAAVTEKNDVLSVGGNVTDGPYGNTTYYGQVATYRRTLNSGVSLVQTYYDITSTWIRAATGSPGAWSYSAGDANGWRRIYDTSLPPTPAEVGAVNKSGDAMTGVLTLANISQPLKTPGGGILANDGNVYINKSGFAGWIDALFLKNTGGTVTGTINQTGGYFDASGEGRGSWASQSTAKAPIFQNINTTSTSEYWPIIKQYYSQAGGAWSMGTLVNTNRFTVHYRTGSVDRQWYFDNSGEFVSYGDIISNSANGLRIAYNNRGFFIRNDGGNTFFMLTNAGDAWGSYNNLRPLYINNDTGNVTMGHTLSVNGRISQSSSYIDNGNLTLNGSGNGRVEFIRSGANPRDMYMFHAGDASRGNRIEISDSASYLVYFERNPSSGIQLVMNGNGSFSDVYIRSDERLKSNFSKIENALDKVDLLDGMVYDKANHIGGEETTREAGLVAQQLQEVLPEAVKKGVDGEQNEILTVSSSAVIALLVNAVKELREEVRELKSR
Physico‐chemical
properties
protein length:721 AA
molecular weight: 77290,55710 Da
isoelectric point:5,84444
aromaticity:0,08738
hydropathy:-0,34716

Domains

Domains [InterPro]
DC_0217
STR
30–720
DC_0217
IPR048390
ATT
464–521
IPR048390 IPR030392 Coil
IPR030392
CHP
625–721
IPR030392
URP85457.1
1 721
Architecture
STR
ATT
STR
STR 30-463 | ATT 464-521 | STR 522-721
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URP85457.1
1 721
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,3517
Central domain 151 366 217 0,3903
C-terminal 367 721 354 0,8272
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-366
C-terminal
367-721

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EC-W1
[NCBI] 		2662274 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URP85457.1 [NCBI]
Genbank nucleotide accession
MN508621.2 [NCBI]
CDS location
range 45641 -> 47806
strand +
CDS
ATGGCTGATTTGAAATTAGGTACAACGCTGGGTGGTGCGGGTATCTGGAGTGCTTCTAACCTTCCTCTATTGCCCTCTGGTGGACAATTAACGTATAAAGGGTGGAGAGTATACACAGAGAACGATCGCCCAACAGCAGAAGATATAAACGCACTGTCGATGATTAACGGCGGTACTGTTGCGAAGAATACTACGTTTAGTCAAAACTTGGTTGTTGGTGCTTCATTAACTTCTAACTCGATTCAATCTAATAGTGTTCTTACCATCCAACGTAGTGCAAACCCTGCGGAAATGATTTTCCATCGTCCTGATATTACGGCAACACCATCATCGGAATCGTGGGTTTTAAACCTGTATGCGAAAGATGGTTTAAATCGAGGTATGGGTTCTTTGATTATTTCTGCACGTAGTGACGGCGGAAATAAAGTATATCTACGGGCGAATAAAGATGGTTCCCCTAATACAAGTTTAACACTGGATTCACAAACCCAACAGGTAACAGTTGAGCAAGGTTCTTTCCGTGTAATCGGGACTTCTAACCTCGGCTTAACGAATGCTACATCAATGGCAGTTAGTGGCGCGGTTACTGCGAATACAGTAACTCCGTCAAACTGGGCTAACCATGATGAACGTTATATCACAGGTATTCCTCGCGGTATGTCTGGAAACAGTTTCGGGGCTGCTGCGGTTACTGAAAAGAACGATGTTCTGTCGGTCGGTGGTAACGTAACGGACGGTCCATATGGAAACACAACATATTACGGTCAGGTTGCCACATATCGCCGTACTCTGAATAGTGGTGTTTCTCTGGTTCAGACTTACTATGATATAACATCAACATGGATTCGTGCTGCGACGGGTTCTCCTGGTGCATGGTCTTATAGTGCGGGTGATGCTAATGGATGGAGAAGAATTTATGATACTTCGCTTCCTCCGACTCCGGCGGAAGTAGGGGCAGTCAATAAATCCGGTGATGCGATGACTGGTGTTCTAACACTGGCAAACATATCTCAACCACTTAAAACACCCGGCGGTGGTATTCTGGCTAATGACGGGAACGTGTATATCAACAAAAGCGGGTTTGCAGGATGGATCGATGCACTGTTCTTGAAAAATACAGGAGGCACGGTAACAGGAACCATCAACCAAACAGGCGGTTATTTTGATGCATCGGGGGAAGGTAGAGGTTCTTGGGCTTCTCAAAGCACTGCAAAAGCTCCGATTTTCCAGAATATTAACACTACATCGACATCTGAATACTGGCCTATTATTAAGCAATATTATTCTCAGGCTGGCGGTGCGTGGTCTATGGGTACGTTGGTAAACACCAACAGGTTTACAGTCCATTACCGTACTGGATCGGTAGATCGTCAATGGTATTTTGATAACTCTGGTGAGTTTGTATCTTATGGTGATATTATTTCCAACTCAGCCAACGGATTGCGTATTGCATACAATAACCGTGGATTCTTTATCCGAAATGACGGCGGTAACACATTCTTCATGCTAACAAACGCAGGTGATGCATGGGGAAGCTATAATAACCTACGTCCTTTGTATATCAATAATGATACTGGCAATGTCACGATGGGACATACATTATCAGTTAACGGACGTATCAGCCAGTCAAGCAGTTATATTGACAATGGAAATTTAACATTAAACGGTAGCGGCAACGGACGCGTTGAATTTATTCGCAGTGGTGCAAACCCTCGCGATATGTATATGTTCCATGCTGGTGATGCTTCTCGTGGAAACCGTATTGAAATCTCTGATAGTGCATCATATCTGGTTTATTTTGAACGCAACCCTTCATCCGGCATTCAGTTGGTAATGAACGGTAACGGTAGCTTTAGCGATGTGTATATTCGTTCTGATGAAAGACTGAAAAGCAATTTCAGTAAGATTGAAAATGCATTGGATAAAGTTGATTTACTTGATGGTATGGTGTACGACAAAGCAAATCATATTGGGGGTGAAGAAACTACCCGTGAGGCTGGTTTAGTCGCACAACAACTGCAAGAAGTATTACCGGAAGCTGTTAAGAAAGGTGTTGATGGTGAACAGAACGAGATCTTAACTGTTTCGTCTTCTGCTGTTATTGCGTTGTTGGTTAACGCAGTAAAAGAACTCCGTGAGGAAGTCAGGGAACTTAAATCCCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
75495549eed2cda7ee864b35062a87bfaa588380e001a0059af1c5c47050cb18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6444
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Constructing and Characterizing Bacteriophage Libraries for Phage Therapy of Human Infections Gibson,S.B., Green,S.I., Liu,C.G., Salazar,K.C., Clark,J.R., Terwilliger,A.L., Kaplan,H.B., Maresso,A.W., Trautner,B.W. and Ramig,R.F. 2019 — GenBank