Protein

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Genbank accession
XNZ85411.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,69
Protein sequence
MDVPAGNRVKVSPVPVANRKLIIFRQTDISKLLVRFQDGKLQTGRNMDLSATQLIMAIQEILDGLRNNNLIVEKQVSTVVDLNKIITEIYKEVLELLAAGGIVSVAPRVWSGKYDPISDDQTDFEIPGADVKDAGFYDTYMNGIGLEPDKDYVVILPTDDDPRSLIRFTKPLVEGDEWFTVLRGYAKPYTGPAPITTLAFPVQTSQGTAVFIGKPQEFALIRCMSDNDTIATVKLIPTSGDNRLVSGSWINLAARGAGKVVLRADPGVTLAVPAGLKAEARARNSVITITCEDADTNVWLVSGDLAME
Physico‐chemical
properties
protein length:308 AA
molecular weight: 33505,05090 Da
isoelectric point:4,90227
aromaticity:0,06494
hydropathy:-0,00227

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNZ85411.1
1 308
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,9979
Central domain 195 297 104 0,0132
C-terminal 298 308 10 0,9921
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-297
C-terminal
298-308

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SBP4phi1
[NCBI] 		3162012 Viruses > unclassified bacterial viruses >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNZ85411.1 [NCBI]
Genbank nucleotide accession
PQ492161.1 [NCBI]
CDS location
range 3 -> 929
strand +
CDS
ATCGATGTGCCTGCGGGCAATCGTGTTAAGGTCAGCCCTGTGCCGGTCGCTAACCGTAAGCTGATCATTTTCCGTCAGACTGACATTAGCAAGCTGCTGGTGCGGTTCCAAGACGGCAAGTTGCAGACCGGGCGTAACATGGACCTGTCCGCAACCCAGCTTATCATGGCAATTCAGGAGATTCTGGACGGCCTTCGCAACAACAACCTGATCGTGGAGAAGCAGGTAAGCACCGTGGTTGACCTGAACAAGATCATCACGGAGATTTACAAGGAAGTTCTCGAACTTCTGGCCGCTGGTGGCATCGTTTCGGTCGCACCTCGTGTGTGGTCCGGTAAGTACGACCCCATTTCGGACGACCAGACGGACTTCGAGATTCCCGGCGCTGACGTTAAGGACGCTGGGTTCTACGACACGTACATGAATGGCATCGGTCTTGAGCCGGACAAGGATTACGTGGTGATCCTTCCGACCGACGACGACCCGCGCTCGCTGATCCGCTTCACTAAGCCGCTGGTTGAGGGCGACGAGTGGTTCACCGTGCTGCGCGGGTACGCTAAGCCGTACACAGGCCCGGCCCCGATCACTACTCTGGCATTCCCGGTGCAGACTTCCCAAGGTACCGCCGTATTCATCGGCAAGCCGCAGGAATTCGCTCTGATCCGGTGCATGTCCGACAACGACACCATCGCAACGGTCAAGCTGATCCCGACTTCGGGCGACAACCGTCTGGTGTCAGGGTCGTGGATCAACCTTGCAGCGCGAGGCGCCGGTAAGGTGGTGCTGCGTGCTGATCCCGGCGTGACTCTGGCCGTACCTGCGGGCCTCAAGGCCGAGGCGCGTGCCCGGAACTCCGTCATCACCATCACTTGCGAGGACGCCGACACGAACGTGTGGCTTGTCTCGGGTGATCTGGCAATGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4ed14e646732fc1a06ae85393e675115df7813a90828338fbebf637fac21fb0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7672
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced Suppression of Stenotrophomonas maltophilia by a Three-Phage Cocktail: Genomic Insights and Kinetic Profiling Whitson,K. and Pride,D. — — GenBank