Protein

View in Explore
Genbank accession
XNO98303.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MALYREGKAAMAADGTVTGTGTKWKSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKTFDFESLQNLANQVKADSQSAGASATAAAASETAAKTSETNAKASETAANSAKTDAQTANWQTQNLRDQVVDLVAGVQAPDKLSGVASSSESWMKIANIKSTGSAYAFVQFIIGGGSDYGAANVPVDIFSLSGRGLPASPLTRGNIDTWFTQRSLIAARPNAKRVNLGAVKKADASYDIYLHAPGGWIPRLWLNLLNVQANNGSITGPIIDRTGYSWITTEPTGIVYNNPADYLLANDSTIPRTNVANTFSQPQAISVPGGNATLTLNGCVVRANNSDVLVLSTPSGSEGMVFRPNGDTSTNGQMTISGNGDVLVNGTVKSNGVDVTASQKLPLKETTATTGVGVNFIGNHTTECSFGIENTAGGSAVFHNYTRGASNSVTKNNQLLGGYGSRPWLGSDYTEHSNAALHFLGAGDASGTNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWIVPDGAMHSDLGLVRSYETLNAAVPKFNAPTNQDGRGLKIVSSDGAPEINMIAPRGTNNSSPAVRAMWCDGSLGNSAKYIGAVQAWSTFFFGASGHDGEKFDSMRGAVNIQATEGWGETSTPTRILFETCAAGSTVRTARWCVEHNGNFFPMGDGGYDIGWGRGRVNNIYAKNGAINTSDGRMKNDVRAMSDPETEAAKAIAKEIGFWTWKEQADMNDVREHCGLTVQRAMEIMESFGLEPFKYGFICYDKWDEQTVVSEYGPANEDGSENPIYKTIPAGDRYSFRIDELNMFIAKGFEARLSALEDKLGM
Physico‐chemical
properties
protein length:875 AA
molecular weight: 93151,74210 Da
isoelectric point:5,33459
aromaticity:0,08229
hydropathy:-0,25360

Domains

Domains [InterPro]
DC_0313
STR
1–873
DC_0313
IPR036388
RBD
729–874
IPR036388
cd10144
CHP
743–865
cd10144
IPR030392
CHP
743–802
IPR030392
IPR030392
CHP
743–873
IPR030392
XNO98303.1
1 875
Architecture
STR
STR 1-874 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNO98303.1
1 875
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,7151
Central domain 244 442 200 0,4945
C-terminal 443 875 432 0,9136
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-442
C-terminal
443-875

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth75
[NCBI] 		3384139 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNO98303.1 [NCBI]
Genbank nucleotide accession
PQ657819.1 [NCBI]
CDS location
range 28945 -> 31572
strand -
CDS
ATGGCACTATACAGAGAAGGTAAGGCGGCTATGGCCGCAGACGGAACTGTTACCGGTACTGGCACAAAATGGAAATCTTCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTAGCGATTACGCGATCCTGTTAAGTGACTCGCTAACCGTTGACGGCCTGGCGCAAGATGTTGCGGAAACGCTGCGCTACTACCAGTCGCAGGAAACTGTAATTGCGGATGCAGTCGAGTTCTTTAAGACGTTTGATTTTGAGTCGCTGCAAAACCTTGCCAACCAGGTAAAGGCGGATTCACAATCCGCAGGTGCAAGCGCTACGGCTGCGGCGGCATCTGAAACCGCAGCGAAGACCTCAGAGACCAATGCAAAAGCATCCGAAACTGCTGCTAACTCTGCGAAGACCGACGCGCAAACTGCGAATTGGCAGACGCAAAATCTTCGTGATCAGGTTGTCGATCTTGTGGCTGGAGTTCAGGCGCCTGATAAGTTAAGCGGGGTTGCTTCCAGCTCCGAATCATGGATGAAGATCGCTAACATCAAGAGCACTGGAAGCGCTTATGCTTTCGTTCAATTCATCATTGGCGGAGGTTCTGATTATGGTGCGGCAAACGTCCCGGTTGATATCTTCTCCTTGTCTGGAAGAGGTCTTCCAGCATCGCCATTGACAAGAGGAAATATTGACACCTGGTTCACTCAACGATCCTTGATTGCTGCCAGGCCAAACGCCAAGCGCGTTAATCTTGGGGCGGTAAAAAAGGCGGATGCTTCATATGATATTTATCTTCATGCTCCGGGTGGCTGGATTCCTAGACTGTGGTTGAATCTTTTAAACGTACAGGCTAACAATGGGTCGATTACCGGGCCGATCATCGATCGCACTGGTTATTCGTGGATTACCACGGAGCCAACCGGGATTGTATATAACAACCCGGCAGATTATTTGCTGGCTAACGATAGCACGATCCCGCGAACCAACGTGGCCAACACGTTTAGCCAGCCGCAGGCAATTAGCGTTCCCGGCGGAAACGCCACGCTGACCCTGAACGGTTGTGTAGTTAGGGCAAATAACAGTGATGTGCTTGTGCTTTCAACTCCTTCTGGTAGCGAAGGGATGGTGTTCCGCCCAAATGGCGACACCTCTACGAATGGCCAGATGACCATTTCGGGAAATGGTGATGTGCTTGTTAATGGCACTGTAAAAAGCAATGGCGTTGATGTTACCGCATCGCAGAAGCTGCCACTGAAGGAGACAACCGCAACAACCGGGGTTGGCGTTAACTTTATCGGCAACCACACAACGGAGTGTTCTTTCGGGATTGAAAATACTGCTGGCGGATCTGCTGTGTTCCATAACTATACGCGCGGCGCATCTAACAGCGTGACGAAGAACAACCAGCTTTTAGGTGGTTATGGTTCTCGCCCGTGGTTAGGATCTGACTATACGGAGCACAGTAACGCGGCCTTGCATTTCCTTGGGGCTGGCGATGCATCTGGAACCAATCACGGTGGCTGGATTAGATTGCTTGTCACCCCCAAAGGTAAGACGATTAGCGATAGGGTTCCGGCGTTCAGGCTGTCAGATAACGGAGATCTCTGGATTGTTCCGGATGGGGCCATGCACTCAGATCTTGGGTTGGTGCGTAGTTATGAAACGCTTAACGCAGCAGTTCCGAAATTCAACGCCCCAACCAATCAGGATGGTCGAGGATTGAAGATTGTATCATCGGATGGTGCGCCTGAAATTAACATGATTGCGCCTCGCGGAACTAATAATTCATCTCCTGCGGTTCGTGCAATGTGGTGCGATGGTAGTTTAGGGAACTCGGCAAAATATATCGGCGCTGTACAGGCATGGTCTACTTTCTTCTTTGGGGCGTCGGGCCACGATGGGGAAAAATTCGACTCAATGCGAGGAGCGGTTAACATTCAGGCTACGGAGGGGTGGGGGGAAACCAGCACGCCAACGCGAATTTTGTTCGAAACATGCGCGGCAGGCTCAACTGTGCGAACCGCTCGCTGGTGCGTTGAACACAACGGGAACTTCTTCCCGATGGGCGATGGCGGTTATGATATTGGATGGGGTAGAGGTCGAGTCAATAACATCTACGCTAAAAATGGGGCAATCAACACCTCAGATGGTCGGATGAAGAACGACGTTCGAGCCATGAGCGATCCTGAAACCGAAGCGGCAAAAGCCATTGCGAAGGAGATCGGGTTCTGGACGTGGAAAGAGCAAGCCGATATGAACGACGTGCGCGAGCACTGCGGTTTGACCGTACAGCGTGCTATGGAGATCATGGAAAGTTTTGGTCTTGAGCCGTTTAAATATGGCTTCATCTGTTATGACAAGTGGGATGAGCAAACGGTGGTTTCAGAATATGGGCCAGCGAATGAAGACGGGTCGGAAAACCCGATCTACAAAACCATCCCGGCTGGTGATCGCTACTCGTTCCGCATTGATGAGTTAAACATGTTTATCGCAAAAGGATTTGAAGCGCGGTTATCCGCACTTGAGGATAAATTAGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
34c1cc979f7a58b422c3b0e1e988045ce7bc7b87387ebb9bdfa7ab0c0b2f1d85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6320
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank