Protein

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Genbank accession
QSJ04199.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKIVYLYDGKPFIVELNDEGEYVYPKDEYTEVAPPEGIYQPFYYDGNEWIGTSKEVWESNQSKPPLTPKAIELLVAQLQMQVMIGNKKTKELEDKLKISEKTLAETVMKVAELENKYGGNV
Physico‐chemical
properties
protein length:121 AA
molecular weight: 13897,70360 Da
isoelectric point:4,67463
aromaticity:0,10744
hydropathy:-0,57686

Domains

Domains [InterPro]
DC_0222
STR
1–120
DC_0222
Coil
Unmapped
96–116
Coil
QSJ04199.1
1 121
Architecture
STR
STR 1-120 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB-SscS-F1
[NCBI] 		2812861 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSJ04199.1 [NCBI]
Genbank nucleotide accession
MW589261.1 [NCBI]
CDS location
range 78024 -> 78389
strand -
CDS
ATGAAAATAGTTTATTTATATGACGGTAAACCTTTCATCGTTGAACTAAACGATGAGGGGGAATATGTTTACCCGAAAGATGAATATACAGAAGTAGCACCACCAGAAGGTATTTATCAACCATTCTACTATGATGGTAATGAGTGGATAGGTACAAGTAAAGAGGTATGGGAAAGCAATCAATCAAAACCACCACTAACACCTAAGGCAATAGAATTATTAGTTGCTCAATTACAAATGCAAGTTATGATTGGTAATAAAAAGACAAAAGAACTTGAGGACAAATTAAAGATTAGTGAAAAAACACTAGCAGAAACAGTAATGAAAGTTGCAGAATTAGAAAACAAATACGGAGGTAATGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62a122388d4230fa66ad45b1915c9033f04cdc38ddb367fd43a1449bbdbac956
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9143
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of vB-SscS-F1 Ji,Y. 2019-07-03 — GenBank