Protein

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Genbank accession
YP_009289247.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MARAWINNWKTTLSAGLSPGELSLTVPDAAAALLPLSGGNWVLLTLADAAGAQHEIVKATARAGGVVTIERAQEATADGNWPAGSVIYAAATAGDLMALQARIAALEGGTPEGALVDASGSVLVDGAGNNLIMENN
Physico‐chemical
properties
protein length:136 AA
molecular weight: 13590,15190 Da
isoelectric point:4,35218
aromaticity:0,03676
hydropathy:0,28897

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage MD8
[NCBI] 		1868596 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009289247.1 [NCBI]
Genbank nucleotide accession
NC_031091.1 [NCBI]
CDS location
range 16329 -> 16739
strand +
CDS
ATGGCGAGAGCCTGGATCAACAACTGGAAGACGACGCTGAGCGCCGGCCTTTCGCCTGGCGAGTTGAGCCTGACGGTGCCGGATGCTGCCGCCGCGCTGCTGCCGCTCTCTGGCGGTAACTGGGTGCTGTTGACGCTGGCGGATGCTGCCGGCGCTCAGCATGAGATCGTGAAAGCAACCGCCCGCGCCGGTGGGGTGGTGACGATCGAGCGCGCCCAGGAAGCCACCGCCGACGGCAACTGGCCGGCGGGGTCGGTGATCTATGCAGCCGCCACGGCCGGCGATCTCATGGCACTGCAAGCGCGAATCGCGGCCCTGGAGGGCGGCACTCCCGAAGGAGCCCTGGTCGATGCGAGCGGTTCGGTTCTCGTCGATGGCGCCGGAAACAACCTGATCATGGAGAACAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd7337d01885199a417447e842b7fd063ba7d312f52479a0d23238c71a3f0124
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8435
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence analysis of two novel Pseudomonas aeruginosa bacteriophages from the Lake Baikal Kabilov,M.R., Sykilinda,N.N., Bondar,A.A., Gorshkova,A.S., Kurochkina,L.P., Mesyanzhinov,V.V., Drukker,V.V. and Miroshnikov,K.A. 2014-02-27 — GenBank