Protein

View in Explore
Genbank accession
QYW02492.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGVLINNDPVLKVNRHPILIDHETQVVLDLTPGESLEAFLYRHIENMDGQPMVVTVGGKVVKRELWAHVFPKANHSIEVRFGVQKTALLIVALVVLSIFTMGAAAAVAAGAATATGIGAGFAAGLAAAGLSATASMAVIGAIQVVGAMIINKVLGPKPPKPPSIERDSVYSISSTRNQVRQYEPAGLLFGVYRVTPDVITIPYTMYQDNDQYLSMVLSPGINVNRCDAIFVGDSPITNYEGQRTWFSGFKGMPEQTIPLFTNVDTTAGGALEAEPGVPGGYVTRTTSMDTIRIQVDISFLLFDLTSKGKKKNNQERIEIQYAPAGSGNWAFAPQQPSLVSDKQSENRRTYGWDVPRGQYDVRLRRLGRNTDGKGATAEFNWVSLLSIQADEANYRGLSRIGVQLKATGQLSGTPDEIRAIMYADSMPIWDGVQWNTATDRSNGLSNPGAQALQYLRGFRDSEGALIAGLGLSDNQIDIESFKSFMVHCTANNYTFDYWMTDSRTHDEILSMIMLAGMGRYSWSPGRITALWAAKGQGHEGVVNMGNIKKGEFQIDYSLAQAADGIEYTYIDRTTWEPKTLRVPAPGVTVMENPARLTGEGIGTEAHAAIMARYHMAQNIYQFKDIVFSQDIEHLAYGQMSIIQLQHDLTQWGYGGRLLEASRASGAIVLRFDEPVPAPATGNAYVGLRIPGESGYRVFQIRTFSGNTDTVTLVGVWPNGVPFPGDSDANPAWDTLWLYDFKQTPGLRCRVTGIQPGDDLSGASISVVPEGDEFWHYVETGEYIPPKNESLLRTQPQVTNLRVREERIVQGDTVFSMISATWRVTGYATNCIVTFGKEGDPPVTVADTNTLTASWRVDDVGRYIIKVLPIGDNGIPGIAAAQLFDVAGADLPPVNPDLFTILEVAGGLRNFNWGWYAETIQSPDFAGVEIRFAPGFAPAVWDDMAPLAAGDHGGGFYTDAFETSQPPKGQYTFALRAINTAGILATEMVVVQKTLNFNLGEVIEQVEEGVNEAFNRIFAETQNRVDAINAVVEQVQQNAADADQKIAAETAARQQEVGRLEDDIAANASALLNEKLEREAAISNEADTRQSADESLAYQISQISAGTGQQFDSKKIWYFDDNAEGWNGTAADGFLNPGAAVATSPAGLGIDSTAYRYIKMRVKRVGNPVWLGQIGWSLTDSTTGNATVVEPSWDNNGIGVVDLDDIAWSGSTLDSITVQLGASVNSTNYFLFDYIAVGRPTPGASVAMVQEETQARIAGDQAEAFQRNTLAVQMRGDYEGTDVAELQQGIVFNERNARINGDEVLATEISSLQVRAGDIESSVTTETQARIDGDTALAEQITTLNSELDGKADASIVNQLTTRVEETEEGLVAVSQSVLKLDAQISPRRAGDTDWRAGDRTIRAGARTIYSVIAEGDLALSRQMTTLNAEFGDFKSGVTDQIEVISNDVSAQAQALLSLTAEVEGKADASAVQLLTSRVEETEFGITALGQSIDQINVSLTGKADASALTALEGTVSTLDGKVAANASAITNVSARVDGKAEASVVQQLSADVQTVNGVVSSINAQYFLAVEANGLIGGMKIGNNGQRVDFAVQADRFSITPPNSSGQRFEYSNGNIRAYHNNGNLCFRAGTW
Physico‐chemical
properties
protein length:1632 AA
molecular weight: 176052,79730 Da
isoelectric point:4,68083
aromaticity:0,08027
hydropathy:-0,16979

Domains

Domains [InterPro]
DC_0129
STR
2–1135
DC_0129 DC_0793
IPR055385
ATT
281–388
IPR055385 IPR053171 DC_0793
NF040662
Unmapped
309–758
NF040662 Coil
QYW02492.1
1 1632
Architecture
STR
ATT
STR
STR
STR 2-280 | ATT 281-388 | STR 389-1135 | STR 1177-1631 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Silvanus
[NCBI] 		2859659 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW02492.1 [NCBI]
Genbank nucleotide accession
MZ326867.1 [NCBI]
CDS location
range 13893 -> 18791
strand +
CDS
ATGGGTGTACTGATCAACAACGATCCGGTGCTGAAGGTCAATCGGCACCCGATCCTGATCGACCATGAAACGCAGGTTGTGCTTGACCTGACGCCGGGCGAAAGTCTGGAAGCGTTCCTGTACCGCCACATCGAAAACATGGACGGTCAGCCGATGGTTGTCACTGTCGGCGGCAAGGTGGTGAAGCGCGAACTGTGGGCGCATGTTTTCCCGAAGGCGAATCACAGCATCGAAGTTCGATTCGGCGTGCAGAAAACCGCACTGCTGATCGTTGCGCTGGTGGTGCTGTCGATCTTCACCATGGGTGCCGCTGCCGCTGTCGCTGCCGGTGCCGCAACTGCCACGGGTATCGGTGCAGGCTTCGCGGCTGGTCTTGCTGCTGCGGGCCTGAGTGCCACCGCATCCATGGCGGTGATCGGTGCGATTCAGGTCGTCGGCGCGATGATCATCAACAAGGTGCTGGGGCCGAAGCCGCCGAAGCCGCCGAGCATCGAACGTGACTCCGTTTACAGCATCAGCAGCACGCGCAATCAGGTTCGCCAGTACGAACCGGCTGGTCTGCTGTTCGGCGTGTACCGCGTCACTCCTGACGTGATCACCATCCCATACACCATGTATCAGGACAACGACCAGTACCTGAGCATGGTGCTGTCGCCAGGCATCAACGTGAACCGTTGCGATGCGATCTTCGTCGGTGACTCGCCGATCACCAACTACGAAGGTCAGCGGACGTGGTTCTCCGGGTTCAAGGGAATGCCGGAGCAGACCATTCCGCTTTTCACCAACGTTGATACTACAGCCGGTGGCGCGCTGGAAGCAGAACCGGGTGTACCGGGCGGCTATGTCACGCGCACCACATCGATGGATACCATCCGTATCCAAGTGGATATTTCGTTCCTGCTGTTCGACCTGACCAGCAAGGGTAAGAAGAAGAACAATCAGGAACGCATCGAAATCCAGTACGCACCGGCAGGCAGCGGTAACTGGGCGTTCGCACCGCAGCAGCCGTCGCTGGTCAGCGACAAGCAAAGCGAGAACCGCCGCACCTACGGGTGGGATGTTCCGCGCGGACAATACGACGTGCGTCTACGTCGTCTGGGTCGCAACACTGACGGCAAGGGTGCCACTGCGGAGTTCAACTGGGTGTCGCTGTTGTCGATCCAAGCCGACGAAGCGAACTACCGGGGTCTGTCGCGCATCGGCGTGCAGCTGAAGGCCACCGGCCAGCTGTCAGGTACGCCGGATGAAATCCGCGCCATCATGTATGCCGATTCGATGCCCATCTGGGATGGCGTGCAGTGGAACACGGCAACGGATCGCAGCAACGGTCTGTCGAACCCTGGCGCGCAGGCGCTGCAGTACCTGCGTGGTTTCCGTGACAGCGAAGGTGCGCTGATCGCAGGGCTGGGCCTGAGTGACAATCAGATCGACATCGAGTCGTTCAAGTCGTTCATGGTTCACTGCACCGCGAACAACTACACGTTCGACTACTGGATGACCGACAGCCGTACGCACGATGAAATCCTGTCGATGATCATGCTTGCCGGTATGGGCCGCTATTCGTGGTCCCCCGGTCGTATCACTGCGTTGTGGGCCGCCAAGGGGCAGGGCCACGAAGGCGTGGTGAACATGGGCAACATCAAGAAGGGTGAATTCCAGATTGACTATTCGCTGGCACAGGCAGCGGACGGCATTGAGTACACCTACATCGACCGCACCACATGGGAGCCGAAGACGCTGCGTGTTCCGGCGCCCGGCGTGACCGTGATGGAGAATCCCGCACGCCTGACCGGCGAAGGTATCGGTACGGAAGCGCACGCGGCGATCATGGCGCGCTACCACATGGCGCAGAACATCTACCAGTTCAAGGACATCGTTTTCTCGCAGGACATCGAACACCTTGCGTATGGTCAGATGTCGATCATCCAGCTGCAGCACGACCTGACTCAGTGGGGTTACGGTGGCCGACTGCTGGAAGCGTCTCGCGCATCCGGTGCCATCGTGCTGCGGTTCGATGAACCCGTACCGGCCCCGGCCACCGGCAACGCCTACGTTGGTCTGCGCATTCCTGGCGAAAGTGGGTATCGCGTCTTCCAGATTCGCACCTTCAGTGGCAACACCGACACGGTGACGCTGGTTGGTGTGTGGCCTAACGGTGTTCCTTTCCCCGGTGATAGTGACGCGAACCCGGCGTGGGATACGCTGTGGTTGTACGACTTCAAGCAGACCCCCGGCCTGCGCTGCCGCGTGACCGGCATCCAGCCCGGCGACGATCTCAGCGGCGCGTCGATCAGCGTTGTGCCTGAAGGTGATGAGTTCTGGCATTACGTTGAAACCGGCGAATACATCCCGCCGAAGAACGAATCGCTGCTGCGCACCCAGCCGCAAGTCACCAACCTGCGCGTACGTGAAGAACGCATCGTGCAGGGTGACACGGTGTTCTCCATGATCAGCGCAACGTGGCGCGTCACTGGTTACGCAACGAACTGCATCGTCACCTTCGGCAAGGAAGGCGACCCGCCAGTGACCGTGGCCGACACCAATACGCTGACCGCAAGTTGGCGTGTGGATGACGTTGGCCGATACATCATCAAGGTGCTGCCCATCGGCGATAACGGGATTCCGGGTATCGCTGCTGCGCAGCTGTTCGACGTTGCCGGTGCCGATCTTCCCCCGGTGAACCCTGATCTGTTCACCATTCTGGAAGTAGCGGGCGGTCTGCGTAACTTCAACTGGGGTTGGTATGCCGAAACGATCCAGTCTCCTGACTTCGCTGGTGTCGAAATCCGCTTCGCGCCAGGGTTCGCCCCGGCCGTATGGGATGACATGGCGCCGCTGGCCGCTGGTGATCACGGTGGCGGCTTCTACACCGATGCGTTTGAAACCAGCCAGCCGCCGAAGGGTCAGTACACCTTCGCGCTGCGTGCGATCAACACGGCGGGAATTCTTGCGACCGAAATGGTGGTCGTACAGAAAACCCTGAACTTCAATCTCGGCGAAGTAATCGAACAGGTCGAGGAAGGTGTCAACGAAGCGTTCAACCGCATCTTCGCGGAAACGCAGAATCGTGTTGATGCGATCAACGCTGTCGTTGAACAGGTACAGCAGAACGCTGCAGACGCTGACCAGAAGATCGCGGCGGAAACCGCAGCACGACAGCAGGAAGTCGGACGGCTGGAAGATGACATCGCAGCCAACGCAAGCGCACTGCTGAATGAAAAGCTGGAACGCGAAGCTGCGATCAGCAACGAAGCGGATACACGACAGTCTGCTGACGAATCGCTGGCCTACCAGATCAGCCAAATCAGCGCCGGTACTGGTCAACAGTTCGACAGCAAGAAGATTTGGTACTTCGATGACAACGCGGAAGGTTGGAACGGTACTGCCGCCGATGGCTTCCTGAACCCTGGCGCGGCGGTTGCTACATCACCGGCAGGGCTGGGTATCGACAGCACGGCCTATCGATACATCAAAATGCGCGTGAAGCGTGTCGGTAACCCTGTGTGGCTGGGTCAGATCGGTTGGAGCCTGACCGACTCCACCACCGGCAATGCGACCGTTGTCGAACCGTCATGGGACAACAACGGTATCGGTGTCGTTGATCTGGATGACATCGCGTGGTCGGGTAGTACGCTCGATTCGATCACCGTTCAACTTGGTGCATCGGTGAACAGCACCAATTACTTCCTGTTCGATTACATCGCGGTCGGTCGTCCGACGCCGGGCGCATCTGTGGCGATGGTGCAGGAAGAAACGCAAGCACGTATTGCTGGTGATCAGGCTGAAGCATTCCAGCGCAACACGCTGGCCGTGCAGATGCGTGGTGACTACGAAGGCACTGATGTGGCCGAACTGCAACAGGGCATCGTGTTCAACGAGCGCAACGCACGCATCAACGGTGACGAAGTTCTGGCAACGGAAATCAGTTCGCTGCAAGTGCGTGCGGGTGACATCGAATCGTCGGTAACCACTGAGACGCAGGCACGTATCGATGGGGATACTGCCCTGGCGGAACAGATCACCACGTTGAATTCGGAACTGGATGGCAAGGCTGACGCCAGCATCGTCAACCAGCTGACAACCCGTGTCGAAGAAACCGAAGAAGGTCTGGTTGCAGTTTCGCAGTCGGTGCTGAAGCTGGACGCACAGATCAGTCCCCGGCGTGCCGGTGACACTGACTGGCGTGCGGGTGACAGGACAATTCGCGCGGGCGCACGCACGATCTACAGTGTGATTGCAGAAGGCGATCTTGCCCTGTCTCGGCAGATGACGACGCTCAATGCCGAGTTTGGCGATTTCAAGTCAGGCGTTACCGATCAGATCGAAGTCATTTCGAATGACGTGTCCGCGCAAGCGCAAGCGCTGCTGTCGCTGACTGCAGAAGTGGAAGGGAAGGCAGACGCAAGTGCTGTGCAGCTGCTGACCAGTCGCGTTGAGGAAACCGAGTTTGGTATCACTGCACTGGGTCAGTCCATCGATCAGATCAACGTAAGCCTGACAGGTAAGGCGGATGCGTCGGCACTGACCGCGCTGGAAGGCACGGTAAGCACGCTCGATGGTAAGGTGGCGGCCAATGCAAGTGCGATCACCAACGTGTCGGCGCGGGTGGACGGTAAGGCCGAAGCCAGTGTTGTGCAGCAGCTGAGTGCAGACGTACAGACGGTGAACGGTGTCGTTAGCTCCATCAACGCGCAGTATTTCCTGGCGGTCGAGGCGAACGGTTTGATCGGCGGCATGAAGATCGGCAACAATGGGCAGCGTGTGGACTTTGCGGTTCAGGCCGACCGCTTCAGTATCACCCCACCAAACAGCAGCGGCCAGCGCTTCGAATACAGCAACGGCAACATCAGGGCGTATCACAACAACGGCAATCTCTGCTTCCGTGCAGGTACTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
10a26b5d24f52fd1ede6171b7d1043dd60ea432a00b787a09b642ce5d243f7ba
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7431
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Stenotrophomonas maltophilia phage Silvanus Wang,N., Garcia,J., Clark,J., Le,T., Liu,M. and Young,R. 2022-03-17 — GenBank