Protein

View in Explore
Genbank accession
UFK09522 [GenBank]
Protein name
Dep108.1
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TSP
Evidence DepoCatalog
Probability 1,00
Protein sequence
MALTKIIAPTASVAGHINLEAYTGTGTTDKASAIAAAVADSKATGYPIVGYGTYHYGSALDLSGVKLVGATLIATGANNAARAVKVVDTVLESVTVVGGFCDHNGGYLDTRKLTIKNNQNSTAAVWSRNRTSTGFVRMVDTTYDTVNYGLLVQGDSGSAITNIRVDGVVANNLRGDAVELNLVHQVTDGIYVGNVDLNNVVGTGTANDFWGIGVGIAGATGYEPGAADTLYARNITVENIHSRNCRQPVHLEKAKNFVVRNCELYPTNSINTASGLLPVGISLAGCTDFTVEGITGEPNNVSTTPMLTTSWGVVAGAYKGPCRNFALRNIKTTGQLRVYTGASDTYTSEVAIENVISGLGSFYKGYASRLDIRGWKSSGLVLQMRHTTGEGVGIMTRNSGIQACIVDVNSTDAYGYPDGSASGMFVDDLYTSGCNFTVEKQTVATAGRGALLKNVPGVYVAPNTYFPAGQYFPKNSIIYKSDLSGMFVVTTGGVFFNATDTIRAAAVGQTYIEANTGVDWAAANPKSGGIKIVIPYAGAGGTDLVTYIVRGAFVSGGVYRVTLADAIANAVPAGTAIRAADPLTYTEVTF
Physico‐chemical
properties
protein length:590 AA
molecular weight: 61542,45720 Da
isoelectric point:6,39879
aromaticity:0,08475
hydropathy:0,08271

Domains

Domains [InterPro]
IPR011050
6–333
IPR011050
UFK09522
1 590
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KPPK108.1
[NCBI] 		2894584 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFK09522 [NCBI]
Genbank nucleotide accession
UFK09522.1 [NCBI]
CDS location
range 41641 -> 43413
strand +
CDS
ATGGCACTGACTAAGATTATAGCCCCCACCGCATCTGTGGCTGGGCATATAAACCTAGAGGCGTATACCGGTACGGGTACCACTGATAAGGCGAGCGCTATCGCAGCAGCTGTAGCGGACTCCAAAGCTACCGGATATCCAATTGTAGGTTATGGCACCTACCACTACGGGTCCGCTCTGGACCTCAGCGGAGTTAAGCTCGTGGGCGCTACGTTAATTGCTACTGGAGCTAACAACGCGGCGCGCGCCGTTAAGGTTGTAGATACTGTTCTGGAATCTGTGACTGTAGTGGGTGGGTTCTGTGACCACAACGGAGGTTATTTAGATACCCGTAAGCTGACCATTAAAAACAACCAGAACAGTACAGCGGCAGTATGGTCTCGTAACCGAACCAGCACAGGGTTTGTACGTATGGTGGATACTACTTACGACACCGTAAACTACGGCCTATTAGTACAAGGTGATAGTGGTTCTGCTATAACCAATATCCGAGTTGACGGCGTAGTGGCTAATAACTTACGAGGGGATGCTGTAGAGTTGAACCTGGTGCATCAGGTGACTGACGGTATCTACGTAGGTAATGTAGATTTAAATAACGTAGTAGGTACCGGTACAGCCAACGACTTTTGGGGTATTGGCGTGGGCATTGCGGGGGCTACAGGTTATGAGCCCGGAGCTGCGGATACCCTGTATGCGCGTAATATCACAGTAGAGAATATCCACTCCAGGAACTGTCGGCAACCTGTGCACTTAGAGAAGGCTAAGAACTTCGTAGTACGCAACTGTGAGCTGTATCCTACAAACAGTATAAACACTGCCTCTGGTCTGCTACCAGTGGGGATTAGTTTAGCGGGGTGCACGGACTTTACCGTAGAAGGTATTACTGGGGAGCCTAATAACGTAAGCACCACCCCTATGCTGACCACTAGTTGGGGTGTAGTAGCCGGTGCATACAAGGGGCCGTGCCGTAACTTTGCTCTGCGCAATATCAAGACTACCGGGCAGCTGCGAGTGTACACCGGGGCTAGTGATACGTATACCTCTGAGGTTGCTATTGAGAACGTTATTTCTGGGCTTGGTAGTTTCTACAAAGGTTACGCCTCTAGACTGGATATACGCGGGTGGAAGAGCAGTGGGTTGGTTCTGCAGATGCGCCACACTACTGGTGAAGGTGTAGGCATCATGACCCGTAATAGCGGTATACAGGCTTGTATTGTAGACGTCAACTCTACGGATGCATACGGCTATCCGGATGGAAGTGCATCTGGTATGTTTGTGGATGACCTATACACTAGCGGATGCAACTTCACTGTGGAGAAGCAGACTGTTGCTACCGCAGGTAGGGGTGCGTTATTAAAGAACGTTCCAGGGGTGTATGTAGCCCCTAATACGTACTTCCCTGCCGGGCAGTATTTCCCTAAGAATTCTATAATCTATAAGTCCGACCTCAGTGGTATGTTTGTAGTTACCACTGGTGGTGTGTTCTTTAACGCGACAGACACGATTAGGGCGGCTGCTGTAGGTCAAACCTACATAGAGGCGAATACTGGGGTGGACTGGGCTGCTGCTAACCCTAAGTCTGGCGGTATTAAGATTGTCATACCCTACGCCGGTGCCGGTGGTACAGACCTAGTTACTTACATTGTAAGGGGCGCCTTTGTAAGTGGGGGCGTATACCGCGTTACTCTGGCAGATGCAATTGCTAACGCCGTGCCTGCTGGTACTGCCATTAGGGCTGCTGACCCCCTGACGTATACCGAGGTGACATTCTAG

DepoCatalog

K-type Target
KL108
Number of Rings

14

Structural Classification
Domain Ranges
N-terminal Domain
1-15
Central Domain
16-455
C-terminal Domain
456-590
Catalytic Information
Mechanism of Action: Hydrolase
Cleaved Bond: β-Glcp-(1→4)-α-Fucp
Experimentally Tested K-types
KL108
Phage Morphotype

Podo-type

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
The structure of Klebsiella pneumoniae K108 capsular polysaccharide is similar to Escherichia coli colanic acid Kasimova, Anastasiya A.; Shneider, Mikhail M.; Evseev, Peter V.; Shelenkov, Andrey A.; Mikhailova, Yuliya V.; Miroshnikov, Konstantin A.; Chebotar, Igor V.; Shagin, Dmitry A. 2023-01-01 — 10.1016/j.ijbiomac.2023.125403