Protein

View in Explore
Genbank accession
WPJ56527.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSKPRTPVEMPDNLISKDKIKLLLAVSDGEVVNDFSLKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQNFTSQVLIRVSRVTPDADGVKVVDAFRVESYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPRNYDPINRTYSGTWDGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDICSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRVMEVSGVQVFLAYRCDAKAGDTLILNTDDGKPVRRTIANVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYDPNKYDAIDNGVITDGRPTSVVDPDSMGAPKDLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSALATATLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNFYKARSVDRIGNVSAWTDYARGMSSTDVNIITDAILDEILDSDAMKELQESAQDSAAKLNDYANSIIQNALANDADVRVMRKENGKRKAEIAHTTVLIANESEARAAEITQLKAQIDDDITAQITTLNEALATESETRATQIGQLQADFAADIDGVKTTMNAGFTQVNQAIANESDARASSEAALDAKIGQNSAALNQKLDSWANVNGVGSMYTMKLGLTYNGQQYSSGMALQLTAQGSSIVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNYIAGQQGWMINKNGGSEFQNTTVRGAIYATDGVFKGTVQAESFIGDIAVAKRYDSMTLRRNQTVQRNGHYQNRGYGMTVVLSCTLVCETYGNGNSQLGYTVDVTFNIGGQQVVRRIYIDAGNIVYGTTAVELRFAADLAADNNNVSFFIKATGRDAVTDYTVTVDNITATAFRTNSNSFT
Physico‐chemical
properties
protein length:1273 AA
molecular weight: 140187,23540 Da
isoelectric point:4,80445
aromaticity:0,09348
hydropathy:-0,26300

Domains

Domains [InterPro]
DC_0014
STR
1–1273
DC_0014
IPR053171
Unmapped
3–875
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
629–716
IPR036116
WPJ56527.1
1 1273
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1273
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ56527.1
1 1273
Domain Start End Length (AA) Confidence
N-terminal 1 505 505 0,8609
Central domain 506 1023 519 0,0555
C-terminal 1024 1273 249 0,5840
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-505
Central
506-1023
C-terminal
1024-1273

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage RCIP0105
[NCBI] 		3094273 Viruses > unclassified bacterial viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ56527.1 [NCBI]
Genbank nucleotide accession
OR532899.1 [NCBI]
CDS location
range 15749 -> 19570
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGTGGTTCAAGCAAGCCACGTACTCCCGTAGAAATGCCAGATAACCTGATCTCAAAAGATAAGATCAAGTTATTGCTTGCTGTTTCGGATGGCGAGGTGGTTAACGACTTCAGCCTGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTGATTGCAGAGTTCCGCCCCGGCACGCAAACGCAGGACTACATTCAGGGTTTCAGCGAGTCAAGTGCTGAATTCCAGGTTGCTCGTGAAGTCACTCACAACACGCCTTATACGCTTACCGTATCGAACAAAAATCTTTCTGCTATTCGCTTTCGCCTGTTATGGCCGCGCGTGCTGACTCAAAAAGATAACGGCGATATGGTCGGATCGGTTGTTGAGTACAAGATCGAGATGGCGGTAGATGGTGCAAGTTATCAGACCTACCTAACTGGCAAGATTGACGGTAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCACGTCGCAGGTGCTTATCCGCGTTAGTCGAGTAACTCCGGACGCTGACGGGGTGAAAGTTGTCGACGCTTTCCGGGTTGAATCCTACGCTGAAGTTATTGATGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGATCTGTTCCAGAACCAGATCCCCACTATCTCACTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGAAACTACGATCCGATTAATCGCACGTACTCCGGAACGTGGGACGGAACTTTCAAATGGGCGTGGAGCAATAACCCGGCATGGGTGCTTTATGACCTGATCATGAATCAGCGCTATGGTTTAGACCAGCGCGAACTTGGCATCCCGGTTGATAAGTGGTCGCTGTACGAGGTGGCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGATGGAACCGCGCTATTTGATGGATGTAGTTGTTCAGTCGCAGGTTGAGGCGTTCCAGTTGGTAAGGGATATTTGTTCCGCGTTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTATCGATTATCGTCGATAAGCCGCGCGATCCGGTGTACCTGTTTACGGCTGATAACGTCGTTGACGGCGTTTTCGTTCGGACGTTCCCAAGCGAAAAGACGATGTACACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTATGAACAGGATGTTGAACCAGTGTTCAACCCGGATGCAGCCATGCGATTTGGTCACAACCCAACGAGCATTACAGCGATCGGGTGTACCAGAAGGACGGAGGCGAACCGCCGTGGGCGTTGGATTCTGCAAACGAACCTAAGCGCTACAACCGTTTCGTTTTCTACTGGCCTGGAAGGTATGATTCCTTCTTGCGGCGATGTAATTTACGTTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTATCAGGCCGCGTCATGGAAGTATCTGGCGTGCAAGTGTTCCTTGCCTACCGCTGCGACGCGAAGGCTGGCGACACTCTGATCCTGAATACCGACGACGGCAAGCCTGTGCGCCGCACAATCGCCAACGTTTCGGCGGATGGTAAGACACTCACGCTAAATGTTGGGTATAACTTTGACGTTGCGCCTGACAGTGTATTCCTGATTGAGAGCGATCAGCTTGCAGCGGAACAGTATGTAGTAACCCGGATTGAAAAGGGTAGTGATGACGACGAATTCACCTTTGCCATCACGGCTACACAGTACGATCCGAACAAGTATGACGCGATCGATAATGGGGTAATTACCGATGGCCGTCCAACTTCGGTTGTCGACCCGGATTCAATGGGCGCTCCGAAAGACTTAACGATTAGCTCTTTCTCCCGCATTGTTCAGGGGATGAGCGTCGAGACGATGGTGATCGGCTGGTCTGCTGTACAGTATGCCAAACTGTACGAGGTACAATGGCGCAAGGATGGAGGTAACTGGAACAACGTTCCGCGCACTGCGACAACGCAGGTTGATATCGAAGGCATCTATGCTGGCGAGTACCAGGCCCGCGTTAGGTGCATTAGCGGCGGGAATGTAGCGTCTCCGTGGTCTGCGTTGGCAACCGCCACACTGACCGGTAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCTGACAACGAGATCTTCGGCATTCGCGTTAAGTGGGCCATGCCGGAAGGAGCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACTCTGATTCCCTACCCGGCGGCTGAATACTGGCATTCAATTTTGCCTGCTGGCTACGTGAACTTCTATAAGGCTCGAAGCGTAGACCGTATCGGCAACGTTTCAGCGTGGACTGATTACGCTCGCGGCATGTCGTCGACTGACGTTAACATCATCACAGATGCGATCCTGGATGAAATCCTGGACAGCGACGCGATGAAAGAACTTCAGGAGAGTGCGCAGGATAGCGCGGCAAAACTCAATGACTACGCGAACAGCATCATTCAAAACGCTTTGGCGAATGATGCGGACGTCAGGGTTATGCGTAAGGAGAACGGCAAGCGGAAGGCTGAGATCGCGCATACTACCGTGCTGATTGCGAATGAGTCTGAGGCGCGGGCGGCTGAAATTACGCAGCTTAAAGCGCAGATTGATGACGATATCACGGCGCAGATCACTACCCTTAACGAAGCACTGGCGACGGAAAGCGAGACGAGAGCAACGCAGATCGGTCAGTTGCAGGCAGATTTTGCGGCTGATATTGACGGCGTAAAAACAACCATGAACGCTGGTTTTACGCAGGTTAATCAGGCTATTGCAAATGAAAGCGACGCGCGGGCAAGTTCAGAGGCGGCACTAGATGCCAAAATCGGGCAGAACTCCGCAGCGCTAAACCAGAAACTCGACTCGTGGGCAAACGTTAATGGCGTCGGTTCCATGTACACGATGAAGTTAGGCTTGACGTACAACGGCCAGCAGTATAGCTCCGGGATGGCGCTACAGCTTACAGCGCAAGGGAGCAGCATTGTTTCGCAGGTGCTGTTCATTGCTGATAGATTTGCTATCATCCGTAATGCGGCGTCGGGAGCGTACACGCTACCGTTTGTTGTGCAGAATGACCAGGTGTTCATGAATAACGCGCTTATTCAGGACGGTTCTATTACCAACGCGAAGATCGGTAACGTCATTCAGTCAAACAACTACATCGCAGGGCAGCAAGGGTGGATGATTAACAAGAATGGTGGCTCTGAATTCCAGAACACTACTGTTCGAGGGGCTATCTACGCTACCGATGGCGTATTTAAAGGCACTGTACAGGCGGAATCGTTTATAGGAGATATCGCCGTAGCAAAACGCTATGACAGCATGACGCTACGCAGAAACCAGACTGTTCAGCGTAACGGGCACTACCAAAACAGGGGCTATGGAATGACCGTAGTTCTTTCCTGTACGTTGGTATGTGAGACTTACGGAAACGGAAACTCACAGCTTGGTTATACCGTTGATGTTACGTTTAATATCGGTGGTCAGCAGGTGGTACGCCGAATTTACATTGATGCTGGCAACATTGTTTATGGCACAACAGCGGTAGAACTTCGATTCGCTGCCGACCTTGCCGCTGACAACAACAATGTTAGCTTCTTCATCAAGGCTACCGGGCGCGATGCCGTCACCGACTATACCGTTACTGTCGACAACATCACAGCAACCGCATTCCGCACAAACTCAAATAGCTTTACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ed3b18ad432b62069ccd38eaff90d93305cd59543f3819074ac0e570a8d3f912
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7456
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50