Protein

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Genbank accession
YP_009803659.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MRTGNLDLMLGAQIKNFRPEVLAADPVVGDLVATQTARIWYNSTEDKYKYFNGTVIKELGGSGGSVEGVILADGSVAMTADLELSGPDQSASADNAAVSKKHVETVVATKQDKIDGLTENAVVIAGADSELQSSSVTAAELGYLSGASSNIQSQITAVSNKANANETALEGKLNAANGQLTGDLDANGNTVANLAAPANPNDAARKIDIDNAIAGIDWLKDSDGIQTDGTLEPVLENGKQYLILDADTINPNFGSITGLTDNMIVSYNGTAFVIVFDPTDSEAGGAVTWIKDIKEYRRFDGTVWTTFGGASEFNAGDGLEKAGNVVNVKVGAGIQITSNAVTAKLDANGGLEDNAGSTRVKLDGATLSRSVDGIAITDGGVGYEQIAAAVLGTGLKQDVDNSKIIVDVAAVKTAGGFIDAEGGAVEALTLTGTDPLVDASVVSKKYVDDAIAAGSGGSAGKVYQYDKTASGDVANTAHTFTHNAGHKFGVVTVVDDTGYQIIPDEVVFIDANSLRVELTTAKKVAIAFVTGTNSYVEPEA
Physico‐chemical
properties
protein length:540 AA
molecular weight: 55541,75650 Da
isoelectric point:4,34144
aromaticity:0,05556
hydropathy:-0,05741

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009803659.1
1 540
Domain Start End Length (AA) Confidence
N-terminal 1 448 448 0,9661
Central domain 449 529 82 0,0041
C-terminal 530 540 10 0,9849
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-448
Central
449-529
C-terminal
530-540

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EamM_Alexandra
[NCBI] 		2201424 Uroviricota > Caudoviricetes > Alexandravirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009803659.1 [NCBI]
Genbank nucleotide accession
NC_047995 [NCBI]
CDS location
range 60247 -> 61869
strand -
CDS
ATGCGTACTGGTAATCTTGATTTAATGCTCGGCGCCCAGATTAAGAACTTCCGTCCTGAGGTTCTGGCTGCTGACCCTGTAGTTGGTGATCTGGTTGCTACCCAGACAGCACGTATCTGGTACAACAGCACCGAAGACAAGTACAAATACTTCAACGGCACTGTGATCAAAGAGCTGGGCGGCAGCGGCGGTTCAGTAGAAGGCGTTATCCTGGCTGACGGCTCTGTGGCAATGACTGCTGATCTCGAACTGTCTGGTCCTGACCAGTCTGCTTCTGCTGACAACGCGGCTGTTTCTAAGAAACACGTTGAAACCGTTGTTGCTACCAAGCAAGACAAAATCGACGGCCTGACCGAGAACGCAGTTGTTATCGCAGGTGCTGATTCAGAACTGCAAAGCTCTAGCGTCACTGCTGCCGAGCTGGGCTATCTGTCCGGCGCAAGCTCTAACATCCAGTCTCAGATCACCGCTGTTAGCAACAAAGCTAACGCGAACGAAACTGCACTGGAAGGCAAGCTGAATGCTGCTAACGGTCAACTGACTGGCGACCTCGATGCTAACGGTAACACCGTTGCTAACCTGGCTGCTCCAGCAAACCCGAACGATGCCGCTCGTAAGATCGATATCGACAACGCAATCGCTGGTATCGACTGGCTGAAAGACTCCGACGGTATTCAGACCGACGGTACTCTGGAACCAGTTCTGGAAAACGGTAAGCAGTATCTGATTCTTGATGCTGACACCATCAACCCGAACTTCGGCTCCATCACCGGCCTGACCGATAACATGATCGTGTCCTACAACGGCACTGCATTCGTTATCGTGTTTGACCCGACTGATAGCGAAGCTGGCGGCGCTGTTACCTGGATTAAAGATATCAAAGAGTATCGTCGTTTTGACGGCACTGTTTGGACTACCTTCGGTGGTGCATCTGAGTTCAACGCTGGTGACGGTCTGGAAAAAGCTGGTAACGTTGTCAACGTTAAAGTTGGCGCTGGTATTCAGATCACTTCTAACGCAGTGACTGCTAAACTGGACGCTAACGGCGGTCTGGAAGATAACGCTGGTTCTACCCGTGTTAAACTGGACGGCGCTACCCTGTCTCGCTCTGTAGACGGTATCGCAATCACCGACGGCGGTGTTGGTTACGAGCAGATTGCTGCTGCTGTTCTGGGCACCGGCCTGAAACAGGACGTAGACAACAGCAAAATCATCGTTGACGTTGCTGCGGTTAAAACTGCTGGTGGCTTCATCGACGCCGAAGGCGGTGCAGTCGAAGCGCTGACCCTGACCGGTACCGACCCTCTGGTTGATGCGTCTGTCGTTAGCAAGAAATATGTTGACGACGCTATCGCTGCTGGCTCTGGCGGTTCTGCTGGTAAAGTCTATCAGTACGATAAGACTGCGAGCGGTGACGTGGCTAACACTGCACACACCTTCACCCACAACGCTGGCCACAAGTTCGGTGTTGTTACCGTTGTTGATGACACTGGCTACCAGATCATCCCTGATGAAGTTGTGTTCATCGACGCGAACAGCCTGCGTGTTGAGCTGACCACCGCGAAGAAAGTTGCGATTGCATTCGTAACTGGTACCAACTCTTACGTTGAGCCAGAAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
79a5eadbbaeb72da4cbe23e3b338ec587ad4e8e8e577888f055083a15287c73d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50