Protein

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Genbank accession
YP_011108639.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MASLYSISNELQDIIFQLEEGEVTDELLEKLALSEEGLKEKIKSYIDVIKKYQAEERECKDEKDRVNKIQKTKTNTYTRLKQVVLDAVLQFGTINKSGNRSIEDSTFKVYTKVSPTIELDDLLIADIIRLYFDIVGEYISSTDTVEELDLDYIAAIITKYLIAESKARDEAEVQLDDVRSFTGVITKDDLIAITTNVSINISLADLHNVENLPLLSWIRQHPHKCNVVSDINKTEIKEHLALNADLHICKVENNVSLIIK
Physico‐chemical
properties
protein length:260 AA
molecular weight: 29589,35460 Da
isoelectric point:4,78871
aromaticity:0,05769
hydropathy:-0,21423

Domains

Domains [InterPro]
IPR008840
STR
4–133
IPR008840
Coil
Unmapped
35–72
Coil
YP_011108639.1
1 260
Architecture
STR
STR 4-133 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudoviricetes sp. 'Rudgehvirus jaberico'
[NCBI] 		3028515 Uroviricota > Caudoviricetes > Crassvirales > Crudevirinae >
Host Bacteroides cellulosilyticus
[NCBI] 		246787 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011108639.1 [NCBI]
Genbank nucleotide accession
NC_091965 [NCBI]
CDS location
range 58372 -> 59154
strand -
CDS
ATGGCAAGTTTATATTCAATTTCAAATGAACTTCAAGATATTATATTTCAACTTGAAGAAGGAGAAGTAACAGATGAGCTTCTTGAGAAGTTAGCACTATCAGAAGAAGGTCTTAAAGAAAAGATTAAATCTTACATTGATGTTATTAAGAAATATCAAGCTGAAGAACGTGAATGTAAAGATGAGAAAGATAGAGTTAATAAGATTCAGAAGACAAAGACTAATACTTATACTCGTTTGAAGCAAGTTGTTCTTGATGCAGTTCTTCAATTTGGTACTATTAATAAATCTGGTAATCGTTCTATTGAAGATTCTACATTTAAAGTATATACTAAAGTATCTCCAACTATAGAATTAGATGATCTTCTTATTGCAGATATTATTCGTCTATATTTTGATATTGTAGGAGAATATATTAGTAGTACTGATACAGTAGAAGAATTAGATTTAGATTATATTGCTGCTATTATAACTAAATATCTTATTGCTGAAAGTAAAGCGAGAGACGAAGCAGAAGTGCAATTAGATGATGTTCGATCCTTTACAGGGGTGATTACAAAAGATGACCTTATTGCAATTACTACTAACGTCTCTATTAATATTTCTCTTGCTGATTTACATAATGTTGAAAATCTTCCTCTTTTATCTTGGATTAGACAGCATCCTCATAAATGTAATGTAGTTAGTGATATTAATAAGACTGAAATTAAAGAACATTTAGCTCTTAATGCTGATTTACATATATGTAAAGTTGAAAATAATGTTTCATTAATAATTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b5c1d50e93d5d7d21f192de40e0a4b1ef3238a31e4ac6086b5c183ad43445ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8478
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Host interactions of novel Crassvirales species belonging to multiple families infecting bacterial host, Bacteroides cellulosilyticus WH2 Papudeshi,B., Vega,A.A., Souza,C., Giles,S.K., Mallawaarachchi,V., Roach,M.J., An,M., Jacobson,N., McNair,K., Mora,M.F., Pastrana,K., Boling,L., Leigh,C., Cram,C., Plewa,W.S., Grigson,S.R., Bouras,G., Decewicz,P., Luque,A., Droit,L., Handley,S.A., Wang,D., Segall,A., Dinsdale,E.A. and Edwards,R.A. 2023 — GenBank