Protein

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Genbank accession
QVW28675.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALKLKWKNPNKGATTVDIYRGDTANVDLTTPLVSLLAGELEWIDTTALFGKTYYYVWAVNTANDRVVSRPQKIEVNDRQGPGPNLLMHGSESYGYFGTVPSADFVNSSAIFAALKSMSGIPNNIIYPTWHKFIRNGKVLFVPDNRIGDVTWNNLYAAGAVYGTNDNGPSNSPGNVNQLCTFELNGDLFLVRAPKAVPDGMVWDNTAVDLDTLPAAKDIYSEYEDIFFPLIAFTPLRQRMVNVAEMNPQSILPTGSGNDRTSIGVCCQEVASATAAAQRGIGSYNWASSSSRDQVRNFSLRGRTSANVWWPIVEYIGRVGEVDLAHI
Physico‐chemical
properties
protein length:327 AA
molecular weight: 35869,96520 Da
isoelectric point:5,46299
aromaticity:0,10398
hydropathy:-0,18318

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVW28675.1
1 327
Domain Start End Length (AA) Confidence
N-terminal 1 68 68 0,7610
Central domain 69 267 200 0,0705
C-terminal 268 327 59 0,9399
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-68
Central
69-267
C-terminal
268-327

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_8
[NCBI] 		2831677 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW28675.1 [NCBI]
Genbank nucleotide accession
MW760841 [NCBI]
CDS location
range 138765 -> 139748
strand +
CDS
ATGGCCTTAAAACTTAAATGGAAAAACCCCAATAAAGGCGCAACCACGGTTGACATTTATCGGGGCGATACCGCGAATGTGGATTTAACCACACCGCTCGTTTCTCTATTGGCCGGAGAGCTTGAGTGGATTGATACCACGGCTCTCTTTGGCAAGACTTATTACTACGTGTGGGCTGTTAACACCGCCAATGACCGCGTAGTCAGTCGTCCTCAGAAAATCGAAGTGAACGACCGTCAGGGCCCAGGCCCGAATCTGCTGATGCACGGTTCAGAATCTTACGGATACTTTGGTACCGTACCGTCGGCGGATTTCGTCAACAGTTCTGCTATCTTCGCGGCCCTGAAATCGATGTCGGGTATCCCAAACAACATCATCTACCCAACGTGGCATAAGTTTATCCGCAACGGTAAAGTGTTATTCGTACCGGATAACCGCATTGGGGATGTGACCTGGAACAACCTGTACGCGGCGGGTGCGGTCTATGGCACCAACGACAACGGCCCGTCCAACAGTCCGGGGAACGTCAACCAGTTGTGTACGTTTGAACTCAACGGTGACTTGTTCCTGGTGCGTGCACCGAAAGCTGTCCCCGATGGCATGGTGTGGGACAACACTGCGGTCGACCTTGACACCTTACCGGCGGCGAAGGATATCTATTCTGAATACGAAGACATCTTCTTCCCGCTGATCGCCTTCACCCCTTTACGTCAGCGTATGGTGAACGTCGCAGAGATGAACCCACAGTCGATTCTACCTACGGGTAGTGGTAACGATCGTACCAGCATCGGTGTGTGTTGTCAGGAAGTGGCAAGCGCAACTGCCGCAGCACAGCGTGGGATCGGGTCTTACAACTGGGCCAGCAGCAGTAGCCGCGACCAGGTGCGTAACTTCTCACTTCGTGGGCGTACTTCGGCGAACGTTTGGTGGCCAATTGTGGAGTATATCGGCCGTGTGGGTGAAGTTGACCTGGCACACATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f16d65496ed7fb51735ee64073815f1b256143719fa2fa2e62d9d519636e64ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6952
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_8 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank