Protein

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Genbank accession
YP_010582094.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MRFQSQLGKETKRMYQEGKNIVRLSLARVLKVNYKYNTVEVITTLHKNNLSKNPNDNGKFSARLPVAFGGTTPDGKVYGSNTLVTVGSLVLIGFMEGSKDYPIVINIYGDTNNQSLLTRTSFTSGDATDEDMQRELWQLFTLFPSMTYKNIDGNGNQEVTFSGKSFMYITDTDQENAYVQDAGFDYADLPSSRYANGELIEPKSPDSPTLLYVHQGIYQKHRVTFFIKSDGTVRLGSRHLDGQGITYMEMTTDGGFQVYQKKDTTNPEEESEKFSRFGVTEDGSVILQSQKHIFEVNNEGIYVDGKSLATFGGGGTDGDGNTITFEDILNDLEDLQTSITVMNGKIETKISKTQYDIDMDGVRRYAEELVDGVETEINDINKTLDNLDEYIDGSFKDGIIDTAEAAAIQAYINTLNTEKADIDAKYTEIYNNEFMSDSEKVKLQTAKGSYDSKHTALIDTINGAIVDGKITPEDREAVDQAFDAYHSAVSGLSAAFESAADVISLNKAKKALEDAKGYTDGEIKTVNSTITQLADSITSKVDSTTFTNVVKDLDSKIATTEDNLKKDINDVDTRIDDVEKKVVYRAEIISTNGMIFRKGTTNTTLFCRVYHGDQEVTNTIDASRFKWTRVSDDADGDTAWNNAHSAGTKSVAITPSDVQVRATFNCTILDENLQ
Physico‐chemical
properties
protein length:674 AA
molecular weight: 74635,66210 Da
isoelectric point:4,66224
aromaticity:0,08457
hydropathy:-0,52478

Domains

Domains [InterPro]
DC_0209
STR
1–673
DC_0209
Coil
Unmapped
561–581
Coil
YP_010582094.1
1 674
Architecture
STR
STR 1-673 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010582094.1
1 674
Domain Start End Length (AA) Confidence
N-terminal 1 128 128 0,6592
Central domain 129 602 475 0,2809
C-terminal 603 674 71 0,1254
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-128
Central
129-602
C-terminal
603-674

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SPG24
[NCBI] 		1497851 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010582094.1 [NCBI]
Genbank nucleotide accession
NC_030903.1 [NCBI]
CDS location
range 133173 -> 135197
strand +
CDS
ATGCGATTCCAATCTCAGCTAGGTAAAGAGACTAAGCGGATGTACCAAGAGGGGAAGAATATTGTCCGTCTTTCCCTTGCCCGGGTATTAAAAGTTAACTACAAGTACAATACAGTCGAAGTTATTACGACTTTACATAAGAACAACCTGTCAAAGAATCCAAACGACAACGGTAAATTCTCAGCACGACTACCTGTAGCTTTCGGAGGGACTACACCGGACGGTAAGGTTTACGGTTCCAATACATTAGTCACTGTAGGCTCTCTTGTACTTATCGGGTTCATGGAGGGGTCAAAGGACTACCCAATCGTTATTAACATCTATGGAGATACCAATAACCAATCCCTTCTCACCCGGACTTCATTCACTAGCGGCGATGCTACGGACGAAGACATGCAGCGGGAACTATGGCAGCTATTTACCTTGTTCCCTTCTATGACATATAAGAATATTGACGGTAACGGAAACCAAGAAGTAACCTTCTCAGGAAAGTCATTTATGTATATCACAGACACGGATCAAGAGAATGCCTACGTTCAGGATGCCGGGTTTGATTACGCAGACCTCCCGAGCTCTAGGTACGCTAATGGCGAGCTTATCGAACCTAAGTCCCCAGACTCCCCGACATTACTATATGTGCATCAAGGTATTTATCAAAAGCATAGGGTAACGTTCTTTATCAAGTCAGATGGAACGGTAAGACTGGGCAGCCGACATCTAGACGGTCAAGGGATCACTTATATGGAGATGACAACCGATGGAGGATTCCAAGTATACCAGAAGAAGGACACCACAAACCCGGAAGAAGAGTCTGAAAAGTTTTCTAGATTCGGTGTTACTGAAGACGGTAGTGTAATTCTCCAGTCACAGAAGCACATCTTCGAAGTCAATAACGAGGGTATTTATGTAGATGGTAAGTCTCTTGCAACATTCGGAGGCGGAGGTACAGACGGAGATGGAAACACCATCACGTTTGAAGACATCCTGAATGACCTTGAGGACCTACAGACCTCTATAACGGTCATGAATGGTAAAATAGAAACAAAGATCAGTAAGACGCAGTATGACATTGATATGGACGGTGTACGGAGGTATGCGGAAGAGTTAGTAGATGGTGTAGAGACAGAGATTAATGACATCAACAAGACTCTAGACAATCTGGATGAGTACATAGATGGCTCTTTTAAAGATGGTATCATCGACACTGCTGAGGCAGCTGCTATTCAGGCGTATATCAACACGTTAAATACTGAGAAGGCAGACATTGACGCAAAGTACACAGAAATTTATAACAACGAGTTTATGAGTGACTCAGAGAAAGTCAAACTCCAGACTGCAAAAGGGAGTTACGATAGTAAACATACCGCATTGATTGATACGATTAATGGAGCTATTGTAGACGGGAAAATTACTCCAGAGGACAGGGAAGCAGTAGATCAGGCATTCGATGCGTACCACAGCGCTGTTTCCGGGCTATCTGCGGCTTTTGAATCGGCAGCCGATGTCATCTCCCTAAACAAAGCTAAAAAGGCTCTAGAGGACGCCAAGGGATACACTGACGGAGAGATTAAAACAGTTAACTCCACCATTACTCAACTAGCAGATTCCATTACGTCAAAAGTAGACTCGACAACGTTTACGAATGTTGTTAAAGACTTAGACTCGAAAATTGCGACTACAGAAGACAACCTGAAAAAGGATATAAACGATGTAGACACTCGCATTGACGATGTCGAGAAGAAAGTAGTGTACCGGGCTGAGATCATTAGTACGAACGGTATGATATTTAGAAAAGGAACGACAAACACTACTCTCTTCTGTAGAGTATATCACGGAGATCAGGAAGTGACAAATACAATTGATGCCAGCAGATTTAAGTGGACCCGAGTATCAGACGATGCAGATGGAGACACTGCGTGGAACAACGCTCACTCTGCTGGAACTAAGTCAGTTGCAATCACTCCTTCAGATGTTCAGGTACGTGCTACTTTCAACTGCACGATTTTAGACGAGAATTTACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dba34d1a3511b30190f6b68f3a363add780dedc73db8f30352e04738448cae68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6990
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome of SPG24 was analyzed in behalf of its correct identification and originality Lee,O.H. 2021-03 — GenBank