Protein

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Genbank accession
UPT53235.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MATLKLVVDQQNYAGPSIGYAPAVMDGLQVWHFPKLTAAQSVKNYPDGDPSTIIGSPTFNNNSIRTTGGDDHIQTVAAETEDFTVLAVARAINPGAANSARPAIGGNLTLNTSGFGLIYGDLNGNEVLQLRRTVDSPLVSTNVSLTVATSGAGEITNYNFSGARNKTSGSDAEQAVFFRNASTDVSETLSISGRPVVLGAGNITAGGLADLYDGELDIAFFAYYNRALSDVEIDAVYKQVRAYLSARNGIEV
Physico‐chemical
properties
protein length:252 AA
molecular weight: 26475,00850 Da
isoelectric point:4,62120
aromaticity:0,07937
hydropathy:-0,06786

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Yong-L1-251
[NCBI] 		2928844 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. PCC 7002
[NCBI] 		32049 Cyanobacteriota > Cyanophyceae > Chroococcales > Geminocystaceae > Picosynechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPT53235.1 [NCBI]
Genbank nucleotide accession
OM868080 [NCBI]
CDS location
range 11653 -> 12411
strand +
CDS
ATGGCAACTCTAAAACTAGTCGTCGATCAACAAAACTACGCTGGCCCAAGCATCGGCTACGCGCCCGCTGTCATGGATGGGTTGCAGGTGTGGCATTTTCCGAAATTGACAGCAGCGCAGAGCGTTAAAAACTACCCCGACGGCGACCCGTCAACAATTATTGGCAGCCCTACGTTTAACAATAATTCGATCCGCACGACAGGCGGCGATGATCACATACAGACAGTCGCTGCCGAGACTGAGGATTTTACTGTTTTAGCAGTTGCCAGGGCGATCAATCCAGGCGCTGCAAACAGTGCACGTCCTGCTATCGGGGGCAACTTGACGCTCAATACGAGCGGTTTCGGATTGATATATGGTGATTTAAACGGAAACGAAGTGCTGCAATTGCGGCGAACTGTTGACAGCCCTCTTGTGTCAACTAACGTGTCGCTGACAGTTGCGACGTCGGGGGCTGGTGAGATTACTAATTACAATTTCTCGGGGGCGCGTAATAAAACATCCGGCTCAGATGCGGAGCAAGCTGTTTTTTTTCGCAATGCATCAACAGATGTTTCCGAGACGCTATCAATTTCAGGCCGACCTGTAGTGCTGGGCGCGGGTAACATCACGGCAGGGGGGCTGGCTGATCTATACGACGGCGAATTAGACATTGCATTTTTTGCGTATTACAACAGAGCGCTCAGCGATGTTGAAATCGATGCAGTTTACAAACAAGTTCGCGCATATTTGTCCGCGCGTAACGGGATTGAGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c3d6ef15763251870f69e2873e0c6b348494b24bfbc64a5b344bf09fea1efaf8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7944
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Synechococcus cyanophage Yong-L1-251 Pan,L., Li,D., Lin,W., Qu,C., Cai,R., Qian,M., Wang,F., Zhou,Q., Liu,W. and Tong,Y. 2024-11 — GenBank