Protein

View in Explore
Genbank accession
YP_002290905.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTFKELVNKVRNLVLEAKNVTIEDTENNFTSDNVEGALKEVFQSGVNAKNNVVTALNSKGAEVTTSDTWEEIKNKIDIKEGRLDLRETTLSNNYPYLVTNGAIKYIERCSGNFKTFEYEEPYFYVIKETHLIKINAIDETVVFDITLANANFSCICVTQEYLFISDNTKLYKINKTTGIEVQSIEGAYYKLCTYGEFIYGVYGDETSSTLHKIRISDMYIMLTKNLVSNGIYNFKGGKFVCNKNAIYATTEHSNSSSITTCHLSKINFDFAIAKDFRIGGYLHMKNIKFLNDFVIASDAERGIEIDSNKKSALVKYDANLNLIVYSDDSKYDNFDIYNGYIYAIYSLSSSPFVKISLNTLKRIDSYRKLTETYPSAGMFVINDIVFFISSGIFRNILSKKVYSDEKGESL
Physico‐chemical
properties
protein length:410 AA
molecular weight: 46587,23530 Da
isoelectric point:5,73235
aromaticity:0,12439
hydropathy:-0,22171

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_002290905.1
1 410
Domain Start End Length (AA) Confidence
N-terminal 1 97 97 0,9710
Central domain 98 311 215 0,4868
C-terminal 312 410 98 0,4072
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-97
Central
98-311
C-terminal
312-410

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridioides phage phiCD27
[NCBI] 		2849704 Uroviricota > Caudoviricetes > Colneyvirus >
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002290905.1 [NCBI]
Genbank nucleotide accession
NC_011398 [NCBI]
CDS location
range 25174 -> 26406
strand +
CDS
ATGACTTTTAAAGAGTTAGTTAATAAAGTTAGAAATCTTGTATTAGAAGCAAAGAATGTAACTATAGAAGATACAGAGAATAATTTTACAAGTGATAATGTAGAAGGAGCATTAAAAGAGGTTTTTCAAAGTGGAGTTAATGCTAAAAATAATGTAGTAACAGCATTAAACTCCAAAGGTGCAGAGGTTACTACAAGCGATACATGGGAAGAAATAAAGAATAAAATTGATATAAAAGAGGGGCGATTAGATTTAAGAGAAACAACACTTTCAAATAACTATCCGTATTTAGTTACAAATGGAGCTATAAAATATATTGAAAGATGTAGTGGGAACTTCAAAACTTTTGAATATGAAGAACCATATTTTTATGTAATTAAAGAAACTCATCTAATTAAAATTAATGCTATTGATGAAACAGTAGTTTTTGACATTACTTTAGCTAATGCTAACTTCTCATGTATCTGTGTTACACAAGAGTATTTATTTATATCTGACAATACTAAATTATATAAAATAAATAAGACAACAGGAATTGAAGTGCAGTCAATAGAAGGTGCTTATTATAAGTTATGTACTTATGGGGAATTTATTTATGGAGTATATGGAGATGAGACTTCTTCTACACTTCATAAAATTAGAATATCTGATATGTATATAATGTTAACTAAAAATTTAGTTTCTAATGGTATTTACAATTTTAAAGGAGGTAAGTTTGTTTGCAATAAGAATGCTATTTATGCTACAACAGAACACTCAAATTCAAGTAGTATTACAACATGTCATTTATCTAAAATAAATTTTGATTTTGCCATTGCTAAAGATTTTAGAATTGGAGGATATTTGCATATGAAAAACATTAAGTTTTTAAATGATTTTGTTATTGCATCTGATGCAGAAAGAGGTATAGAAATTGATAGCAACAAAAAAAGTGCTTTAGTAAAATATGACGCAAATTTAAATTTAATTGTGTATTCAGACGATAGCAAATATGACAATTTTGATATATATAATGGATATATATATGCTATATATTCGCTTTCTAGTAGTCCTTTTGTAAAAATAAGTTTAAATACTCTTAAACGTATCGACAGCTACCGAAAACTTACTGAAACATACCCAAGTGCTGGTATGTTTGTAATAAATGATATAGTTTTCTTTATTAGTAGTGGAATTTTTAGAAATATATTGTCAAAAAAGGTTTATTCGGATGAGAAAGGAGAATCATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
18b78ebdd3ef4f229e73485147714260ee640f93f227487ae63b792e1a00fbdd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7637
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50