Protein

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Genbank accession
YP_009217994.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,51
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADVTVYWKLADGALIEKTYDDSHAAPTPPAGATVLTLAQYNTQVAAVQAAYQTQQTNTRATEATNNKLRNSAPVRLVASANAPAWVKAATTYICDGVADQVEIQAAVDAAFAEGGGTVQLSSKDFLTSGPVTVHPTVRLVGMHGDHIFNPGQFIPTSVIRPQSGFVGGAVLVLLDQINGGYTGKSAEQQIQSLTIDGTGVGGTVHGIQGGGYIHGVLLRDVAIRNVSGKGVYTFFENGAQPFSWTLDHVVVDNSAGTGVHLINHSDGTLRDVVSIGAGGNAFEFSNMPNSRVSDCRAEWSEGYGYYVTGNFGNGQGSGGMSFNNCSSDRNRFDGMLVNATGNAPLLLSNCTFRRDGRVGGAGGGDYSGFRATAAGMPVIIDNLGVYPGVDDDGTGTNSPVNAFKVSGSTYVALNGGFLHGATNGYVDGGGNGVLRRGPNIGVRTGPTNAPVDDFNGGWDADGYTVMDGGQVNGQLSFYSGQADALKLGTAGAGIAVKEGANARMGVATLAAGTVTVANTSVTAKTRIFLTGQNNGASGTPGVPRVSARVAGTSFTITSSSASDTSTVAYELREPA
Physico‐chemical
properties
protein length:576 AA
molecular weight: 59035,51530 Da
isoelectric point:5,45640
aromaticity:0,07639
hydropathy:-0,10608

Domains

Domains [InterPro]
IPR011050
STR
75–430
IPR011050 IPR056204
IPR012334
STR
94–427
IPR012334 IPR056204
IPR006626
Unmapped
214–236
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR039448
ENZ
244–357
IPR039448
DC_0770
STR
250–505
DC_0770
YP_009217994.1
1 576
Architecture
STR
ENZ
STR 75-505 | ENZ 506-572 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009217994.1
1 576
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,9811
Central domain 102 476 376 0,9829
C-terminal 477 576 99 0,9098
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-476
C-terminal
477-576

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage phiSAJS1
[NCBI] 		1755682 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces avermitilis
[NCBI] 		33903 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009217994.1 [NCBI]
Genbank nucleotide accession
NC_029005 [NCBI]
CDS location
range 28480 -> 30210
strand +
CDS
ATGGCCGATGTGACGGTCTACTGGAAGCTGGCCGACGGCGCCCTGATCGAAAAGACGTACGACGACAGCCACGCGGCGCCTACGCCTCCGGCCGGTGCCACCGTCCTGACACTGGCCCAGTACAACACCCAGGTGGCTGCTGTACAGGCCGCGTACCAGACGCAGCAGACGAACACCCGCGCGACAGAGGCCACGAACAACAAGCTGCGCAACTCCGCGCCGGTGCGCCTGGTCGCGTCCGCCAACGCCCCCGCGTGGGTGAAGGCGGCCACCACGTACATCTGTGACGGTGTGGCCGACCAGGTGGAGATCCAGGCCGCTGTGGACGCGGCGTTCGCCGAAGGTGGCGGCACCGTCCAGCTGTCTTCAAAGGACTTCCTGACGTCCGGGCCGGTCACCGTCCACCCGACGGTGCGCCTGGTCGGCATGCACGGGGACCATATCTTCAACCCCGGGCAGTTCATACCCACGTCCGTGATCCGGCCCCAGTCCGGTTTCGTCGGCGGAGCTGTGCTGGTCCTGCTGGACCAGATCAACGGCGGGTACACCGGCAAGTCTGCTGAGCAGCAGATTCAGTCCCTGACCATTGACGGCACCGGCGTGGGCGGCACCGTCCACGGCATCCAGGGCGGAGGGTACATTCACGGCGTCCTGCTCCGGGACGTCGCCATCCGCAACGTGTCCGGCAAGGGCGTGTACACCTTCTTTGAGAACGGCGCGCAGCCGTTCAGCTGGACGCTGGACCACGTGGTCGTGGACAACTCTGCCGGGACCGGCGTCCACCTGATCAACCACAGTGACGGCACCCTGCGCGACGTGGTGTCGATCGGTGCCGGTGGCAACGCGTTCGAATTTTCGAACATGCCGAACAGCCGTGTCAGCGACTGCCGCGCGGAGTGGTCGGAGGGTTACGGGTACTACGTCACCGGCAACTTCGGCAACGGCCAGGGCAGCGGCGGTATGTCCTTCAACAACTGCTCTTCCGACCGGAACCGGTTTGACGGGATGCTGGTCAACGCGACCGGCAACGCGCCGCTGCTGCTGTCCAACTGCACGTTCCGCCGGGACGGCCGGGTGGGCGGAGCGGGCGGGGGCGATTACTCCGGCTTCCGCGCCACGGCCGCCGGGATGCCTGTCATCATCGACAACCTGGGCGTCTACCCCGGCGTGGACGACGACGGCACCGGCACCAACAGCCCCGTGAACGCCTTCAAGGTCAGCGGCAGCACGTACGTGGCCCTGAACGGAGGCTTCCTGCACGGCGCCACGAACGGCTATGTGGACGGAGGCGGGAACGGAGTCCTGCGCCGTGGCCCCAACATCGGTGTCCGGACCGGCCCCACGAACGCACCCGTGGACGACTTCAATGGCGGCTGGGACGCGGACGGGTACACCGTCATGGACGGCGGCCAGGTGAACGGCCAGCTGTCCTTCTACAGCGGCCAGGCAGACGCCCTGAAGCTGGGGACGGCGGGCGCCGGTATCGCGGTCAAGGAAGGCGCCAACGCGCGCATGGGCGTGGCAACGCTGGCGGCTGGCACGGTCACCGTGGCGAACACCAGCGTGACGGCCAAGACCCGCATCTTCCTGACTGGCCAGAACAACGGGGCCAGCGGGACCCCGGGCGTGCCGCGTGTGTCCGCGCGCGTGGCCGGTACCAGCTTCACCATCACCAGCAGCAGCGCCAGCGACACGTCCACTGTGGCGTACGAACTGCGCGAACCTGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
17ecf661646f67b2fdd9c74435ada3113ba7ad78958b3b2d0023e27aaf76e360
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7946
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequence analysis of the Streptomyces avermitilis bacteriophage phiSAJS1 Wang,S. and Qiu,Y. 2010-07 — GenBank