Protein

View in Explore
Genbank accession
UGL61095.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTPKTVRTFTLDGAKKDFTIPFEYLARKFVVVTLIGATRRELILNTEYRFSTATTITTNKAWGPADNFDLIEIRRLTSATERLVDFADGSILRAYDLNISQVQSLHIAEEARDLTADTIGVNNDGDLDARARKIVNLADGVNDGDAVNLRQQKQWAGSALNQANAAAASAQQAATNNQQSLVNNQQSYQNLVAAQQQATNSQTSANNSANSASASQTSRLASETARDLSQSWSSKAEDQVVSGGLYSSYHYSRKSAASAAASQTSATNSASSASFSTTEANRATTQADRAKTEADKLGNANAFMGSINDVTGTTVRFKDTWTVRMTTLWADKIYGNAATFRSGLSVTGNASITGSLTLNQAAYARSVVEVAPQSSNAENVHLWFRDIDRATERGLIYADSAKQLHIRTAGGAGGETVISSGNIWRFGASIEVNRNGGQSYIYSPYAQLDGGMYNQCNLQLQGTGSGVANLGFHNAGRVAGALWLNNDNMLWWMQNNGTNHQLTTSYNCVSHVAGMTSDIVGCIATMQNVSGANQGQNAVLGGGSLRYSTHNNPSGIAGSGSWRNLGWSNNGGVSNWIRYA
Physico‐chemical
properties
protein length:582 AA
molecular weight: 62172,47230 Da
isoelectric point:8,29123
aromaticity:0,07560
hydropathy:-0,39811

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0319
STR
1–580
DC_0319
UGL61095.1
1 582
Architecture
ATT
STR
ATT 1-131 | STR 132-580 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL61095.1
1 582
Domain Start End Length (AA) Confidence
N-terminal 1 247 247 0,8835
Central domain 248 446 200 0,5173
C-terminal 447 582 135 0,9605
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-247
Central
248-446
C-terminal
447-582

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Eir4
[NCBI] 		2900147 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. tomato str. DC3000
[NCBI] 		223283 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae group genomosp. 3

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL61095.1 [NCBI]
Genbank nucleotide accession
OL581611.1 [NCBI]
CDS location
range 34802 -> 36550
strand +
CDS
ATGGCCACTACACCGAAAACGGTGCGGACATTCACCCTTGATGGTGCCAAGAAGGACTTCACGATTCCCTTCGAGTATCTCGCTCGGAAGTTCGTTGTCGTGACTTTGATTGGTGCCACTCGACGTGAGCTGATCCTCAATACCGAATACCGCTTCTCAACCGCTACCACTATCACGACCAACAAGGCGTGGGGGCCAGCGGACAACTTTGACCTGATCGAGATTCGTCGTCTGACCAGCGCCACTGAGCGACTCGTTGACTTCGCCGATGGTTCGATCCTTCGGGCCTACGACCTGAACATCTCGCAGGTGCAATCGCTGCACATCGCTGAGGAAGCCCGTGACTTGACCGCTGACACAATCGGCGTGAACAACGATGGTGACCTCGATGCCCGTGCCCGCAAGATCGTCAACCTCGCTGATGGCGTGAACGACGGTGACGCTGTGAACCTGCGCCAGCAGAAACAATGGGCAGGCTCTGCGTTGAACCAAGCGAACGCCGCTGCTGCTTCTGCACAACAGGCTGCTACGAACAACCAGCAGTCTCTGGTCAACAACCAGCAGTCCTATCAGAACCTCGTTGCGGCCCAGCAACAGGCCACCAACAGTCAGACCTCTGCGAACAACTCTGCGAACTCCGCAAGTGCCTCTCAGACCTCCCGTCTGGCCTCTGAGACTGCCCGTGACTTGTCCCAATCGTGGTCCTCGAAGGCTGAAGATCAGGTCGTCTCTGGGGGCCTCTATTCGAGCTACCACTACAGCCGTAAGTCTGCTGCGAGCGCTGCTGCGAGTCAGACCTCTGCGACCAACTCTGCGAGTTCTGCGAGCTTCTCTACGACTGAAGCCAACAGGGCAACCACTCAGGCCGACCGTGCGAAGACCGAGGCTGACAAGCTGGGCAACGCAAACGCCTTCATGGGTTCGATCAATGACGTGACTGGCACGACTGTCAGGTTCAAGGACACTTGGACGGTTCGCATGACCACCCTGTGGGCCGACAAGATTTACGGTAACGCTGCCACATTCCGATCCGGTCTGTCGGTGACTGGTAATGCCTCTATCACCGGATCGTTAACCCTGAATCAGGCGGCATACGCCCGGTCAGTGGTCGAGGTTGCCCCACAATCAAGTAACGCCGAAAACGTCCACCTATGGTTCAGGGACATTGATCGGGCAACCGAGCGTGGACTCATCTATGCCGACTCTGCCAAGCAGCTTCACATCCGAACTGCTGGAGGTGCAGGTGGTGAGACCGTTATTAGCTCTGGGAACATCTGGAGGTTCGGCGCTTCAATCGAAGTAAACCGTAATGGTGGTCAATCGTACATCTACAGCCCCTATGCCCAGCTCGATGGCGGAATGTACAACCAGTGCAATCTTCAGCTCCAAGGCACAGGAAGTGGCGTAGCCAACCTCGGGTTCCATAACGCCGGTCGAGTGGCTGGTGCCCTGTGGCTAAACAACGACAACATGCTTTGGTGGATGCAGAACAACGGGACCAACCACCAGTTGACCACGAGTTACAACTGCGTGAGCCACGTTGCAGGTATGACCTCTGACATCGTTGGCTGTATCGCCACCATGCAGAACGTCTCTGGTGCCAACCAAGGACAGAACGCTGTTCTCGGCGGTGGCTCCCTGCGTTACTCGACTCACAACAACCCCTCGGGCATCGCTGGGTCTGGCTCGTGGCGAAACCTCGGCTGGTCTAACAACGGTGGCGTGTCTAACTGGATTCGCTACGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
41c0a9bc066013fcd7e5fa6c521ade254829548e3fd2701a3d8862ed1ffaea9b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6769
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pseudomonas phage Eir4 Korniienko,N., Kharina,A., Zrelovs,N., Jindrichova,B., Moravec,T., Budzanivska,I., Burketova,L. and Kalachova,T. 2020-09-06 — GenBank