Protein

View in Explore
Genbank accession
XMN00756.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKTQFNQSQGSTSRETNKEAIARIFGLKKSQVGYLSTSTPIDSYVILFDKETQTCWYRGAATGTPTSWSISGEILTLITNLGTFTCKHATTISDLEKPIGASKINTAINKTVEEIIQAPYIITGRTSIKTPKWGAPTDSASDPAAATANTAAINLMLASSNSCFELDDTPRYINNTLLISKSMNIHGPGKSTPCLIFSGGDVPIIAQSRYANPNIAAFNLIRIIGVRITDLAVSRPTYWAVDLTNGHSNAMLDCFIDFPGSSVLTDKYGVALGFAKGSSLLGGSTKTFVADFSENRLVNGKLFMNTSDYYIVHNELWGTGRDNAVELGFGGLFADNQLVPGLNSGCFHFSDLGFDHDTMCYSNNYFDGNTSASVISGVGIKSDTVGLRDANITDNRFWFLNSSGISVPKLYQCRVSDNNFKDCDSDDTGDDDIICPDVYGTTFDNTHTRSVAAPKTGATRVNLGRIWNIVGKIGYAPSVLDGTVGFSSAYAPSSVTNLDVFDLRGVGSRMALTRTTDPLAANFPGKTIVVSGKIKISTGSSWVTLNATTPNLTTPTDLNNIADGPYRVPDPTIHTSIPSGLTGSCLLETWTIADNSNYKIQRITKLSTGKLYTRERDNGNWSSWSV
Physico‐chemical
properties
protein length:626 AA
molecular weight: 67433,83400 Da
isoelectric point:6,09788
aromaticity:0,08946
hydropathy:-0,16885

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–92
G3DSA:3.30.2020.50 IPR011050 cd19958
DC_1143
STR
364–625
DC_1143
XMN00756.1
1 626
Architecture
ATT
STR
ATT 1-92 | STR 149-625 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XMN00756.1
1 626
Domain Start End Length (AA) Confidence
N-terminal 1 135 135 0,9677
Central domain 136 483 349 0,9585
C-terminal 484 626 142 0,9553
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-135
Central
136-483
C-terminal
484-626

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Madison
[NCBI] 		3374132 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XMN00756.1 [NCBI]
Genbank nucleotide accession
PQ368523.1 [NCBI]
CDS location
range 37132 -> 39012
strand +
CDS
ATGAAAACGCAGTTTAACCAATCCCAAGGCTCGACTTCACGCGAAACCAACAAAGAAGCGATTGCTCGTATCTTCGGTTTGAAGAAGTCTCAAGTCGGCTATTTGTCGACATCCACCCCAATTGACTCATATGTCATACTATTTGACAAAGAAACTCAGACTTGTTGGTATCGTGGTGCCGCGACAGGAACACCAACATCATGGTCTATTTCCGGGGAAATTTTGACGCTGATTACGAATTTGGGGACATTTACATGTAAGCACGCAACAACGATATCTGATTTAGAAAAACCTATCGGTGCAAGCAAAATAAATACGGCCATAAATAAAACTGTGGAAGAAATAATTCAAGCTCCTTATATCATAACGGGTCGAACTTCCATTAAAACCCCTAAATGGGGTGCTCCAACAGATTCTGCTAGTGATCCTGCGGCTGCGACTGCCAACACTGCCGCTATAAATTTGATGTTGGCTTCTAGTAATAGTTGTTTTGAACTGGATGACACCCCGAGATATATAAACAATACGTTATTGATTTCTAAATCCATGAACATTCATGGCCCAGGTAAATCAACTCCTTGTTTAATCTTTTCGGGTGGTGATGTTCCCATAATTGCTCAATCTCGTTATGCGAATCCTAACATCGCTGCATTTAATCTCATTCGAATTATAGGTGTTAGGATAACTGATTTGGCCGTCAGTCGTCCTACTTATTGGGCTGTAGATTTAACGAATGGTCATAGTAATGCCATGCTAGATTGTTTTATAGATTTTCCAGGTTCCTCAGTCTTAACTGACAAATACGGAGTGGCTCTCGGGTTTGCTAAAGGGTCTTCTCTTTTAGGGGGAAGCACCAAAACATTTGTTGCGGACTTTTCTGAAAATCGACTAGTCAATGGCAAACTTTTTATGAACACTTCAGACTACTACATTGTTCACAATGAACTCTGGGGTACTGGGAGGGATAACGCTGTAGAATTGGGATTCGGTGGCCTGTTCGCCGATAACCAATTAGTGCCGGGTTTAAACTCTGGTTGTTTCCATTTTAGTGATTTAGGCTTTGACCATGATACTATGTGTTACAGCAATAATTATTTTGATGGTAATACCAGTGCTTCAGTCATAAGTGGTGTTGGAATAAAGTCTGATACCGTTGGATTAAGAGACGCCAATATAACGGACAACAGATTTTGGTTCCTTAATTCTTCCGGAATAAGCGTCCCTAAATTATATCAATGTAGAGTGTCAGACAATAACTTCAAAGATTGTGACTCTGATGATACCGGTGATGATGATATCATATGTCCTGATGTTTACGGTACTACTTTTGATAATACACATACGCGATCTGTCGCCGCGCCTAAAACTGGTGCAACCCGTGTGAATTTGGGTAGAATATGGAATATTGTGGGGAAAATCGGGTACGCCCCTTCTGTATTAGACGGAACCGTCGGGTTCTCTTCCGCGTATGCTCCATCATCGGTTACGAATCTAGATGTATTTGATCTTCGTGGTGTTGGTTCAAGAATGGCATTGACGAGAACAACAGATCCGCTGGCAGCCAATTTTCCAGGAAAAACTATCGTTGTTTCCGGGAAAATTAAGATATCCACAGGTTCTTCTTGGGTAACGTTGAACGCCACTACACCGAATTTGACAACACCTACAGACTTGAATAACATCGCTGACGGCCCATATAGAGTTCCAGATCCCACGATTCATACCAGTATACCATCGGGATTAACTGGTAGTTGCTTGTTGGAAACATGGACAATAGCAGACAACTCGAATTATAAAATACAACGGATTACGAAATTGTCCACCGGGAAGTTGTATACCAGAGAACGCGACAATGGTAATTGGAGTTCTTGGTCTGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7b57f757405ba4a46624e9d24ff305b21352be51456775cbf30f3497a9284c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6692
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella phage Madison Scott,M.R., Mora,D.A., Lancaster,J., Lessor,L. and Gill,J.J. 2015-03-31 — GenBank