Protein

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Genbank accession
YP_007877612.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MSKQGLLASAKPGATTNTVLYKAPIDASASTVLSVTAQGGSNTSYDVAMKDYDQHVVLDASTYKLHTGDVFTGYRFNLGTAVGADQGLNVNQLLTSADGEKTAVFESFYIPPFTSIAVKNVAIRSVAVESVTGTFAVGNTISKGSGGNTSVATIFSVASGSGGSTLYIGPSTLNGSGSEFTDGDSITASGGATGTISSGGVGTAANEFTFTTSGGTEDLYLGTTLSILGDRTYRFDVSDSSMSSIDFKLSETVNGEWGPDGTAGNTDDGAEYTTGKTTNGTAGSSGAYVQYDLTANTSLPAALYYYEGTTGTAANSNFGGADRLLTTSSSYSYDSVFVYNVSGTWVDNTDTFTYNGVTYTVTSQTAGPYGFVRDYTGTALYVVLGEGSANIAGSDTFLDNPKLATGARSTVTVSSVTSSGATVETKHYIRKDNAITANTTEEIKSLVIGPGQRLVVENNDADCSFTLVGFEDSSTGFTTRAYAQTTGTSGSGGGS
Physico‐chemical
properties
protein length:495 AA
molecular weight: 50687,30120 Da
isoelectric point:4,34997
aromaticity:0,09495
hydropathy:-0,14889

Domains

Domains [InterPro]
DC_0373
STR
1–485
DC_0373
YP_007877612.1
1 495
Architecture
STR
STR 1-485 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-RSM1
[NCBI] 		536444 Uroviricota > Caudoviricetes > Pantevenvirales > Emcearvirus > Emcearvirus gerard
Host Prochlorococcus marinus str. MIT 9303
[NCBI] 		59922 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007877612.1 [NCBI]
Genbank nucleotide accession
NC_021071.1 [NCBI]
CDS location
range 35473 -> 36960
strand -
CDS
ATGTCTAAACAAGGATTACTTGCCTCAGCAAAACCAGGTGCGACTACCAATACGGTGCTCTACAAAGCACCTATCGATGCGTCTGCAAGTACGGTTTTGTCTGTGACTGCACAAGGTGGATCAAACACCTCGTATGATGTTGCTATGAAAGACTACGATCAACATGTAGTTCTGGATGCTTCAACTTACAAATTACACACTGGTGACGTGTTCACTGGTTATAGGTTTAACTTAGGTACAGCAGTTGGTGCTGATCAAGGTCTTAACGTTAATCAATTACTAACATCTGCTGATGGAGAAAAAACAGCAGTGTTTGAATCATTTTATATTCCTCCTTTCACTTCGATTGCAGTGAAAAACGTCGCAATCAGATCGGTTGCAGTTGAATCTGTAACTGGTACTTTCGCAGTTGGTAATACTATTTCAAAAGGATCAGGTGGTAATACATCTGTTGCAACCATTTTTTCTGTAGCATCTGGTTCTGGTGGTTCAACTCTTTATATCGGTCCCTCTACCTTGAACGGTTCTGGAAGTGAGTTTACTGATGGTGATTCTATCACTGCATCTGGTGGTGCAACTGGTACTATTTCATCTGGTGGTGTTGGTACTGCTGCAAACGAGTTTACATTTACTACCTCTGGTGGAACTGAAGATTTATATCTTGGAACTACATTAAGTATTTTAGGAGATAGAACCTATCGTTTTGATGTATCTGACTCAAGTATGAGTAGTATAGACTTCAAACTCTCTGAAACTGTAAATGGTGAGTGGGGTCCTGACGGGACTGCAGGTAACACTGATGATGGTGCAGAGTATACCACTGGTAAGACTACTAACGGAACTGCAGGTTCTAGTGGTGCATACGTTCAGTATGATCTCACTGCAAACACTAGTTTACCCGCTGCACTATACTATTATGAAGGAACAACTGGAACTGCTGCTAACTCAAACTTTGGAGGAGCAGACAGACTTCTCACTACATCAAGTTCATATTCTTATGACTCTGTTTTCGTTTACAATGTTTCTGGAACATGGGTAGATAACACAGATACCTTTACATATAACGGTGTAACTTATACTGTTACTAGTCAGACTGCAGGTCCTTATGGATTTGTTCGTGATTATACAGGCACTGCTCTGTATGTTGTTCTTGGAGAAGGTTCTGCAAACATTGCAGGTTCTGATACTTTCTTAGATAATCCCAAGTTAGCAACTGGTGCTCGTTCTACAGTAACAGTTTCTTCCGTTACTTCTTCGGGTGCAACAGTAGAGACTAAGCATTATATCCGTAAGGACAATGCTATCACTGCGAACACTACAGAAGAGATCAAGTCTCTTGTTATTGGACCAGGGCAAAGACTGGTCGTTGAGAACAATGATGCAGATTGTTCATTCACTCTAGTCGGTTTTGAAGACAGTTCTACTGGATTCACAACTCGTGCTTATGCTCAAACTACTGGAACTTCTGGTTCTGGCGGTGGAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e39d9578d0b454c2b16ee79ce03063431cbc57357b2b93bc7daecebde285b14
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4689
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-RSM1 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank