Protein

View in Explore
Genbank accession
QBX31200.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
Protein sequence
MFYAVPVGTLNYDELVKNHGKATITFIVSDGLAHSKNIQSFPFAKNANGIFEAKIINNGTESVPVNYRIKLSKESGYVAIASQYGGIQYGLKDEADAVLETKSVLLNNSFSSWTDGTTFYQDLTKKSATTMASNADNKGTLGILPTYTNTTNSNFFGAIKELALSQTAKDWRIWARARFETGLMGQTGQWTLAVVDTNNHVLAAMSIDKFDRAGNSAKISFIVGDNLGNMRTVKTIDFTPSAYLSQNPYGYEALVQGRNPFDIIKEGDKITFFWYGTHYSYVEPSIKDSQAKLVQFFVGQLNGRNTTNQLVTHHYLMEFSFHKLNVSSWRDVPNRYPSGSELFIDSSGFINPDEKGRLYVNNLITNDDEILGTEFFEVPPGETTVQLIVSSFAEVLEANAEIEEVYI
Physico‐chemical
properties
protein length:407 AA
molecular weight: 45281,16160 Da
isoelectric point:5,27684
aromaticity:0,12039
hydropathy:-0,25651

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX31200.1
1 407
Domain Start End Length (AA) Confidence
N-terminal 1 65 65 0,6627
Central domain 66 264 200 0,3287
C-terminal 265 407 142 0,4697
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-65
Central
66-264
C-terminal
265-407

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan626
[NCBI] 		2548286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus uberis C5072
[NCBI] 		1450182 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus uberis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX31200.1 [NCBI]
Genbank nucleotide accession
MK448995.1 [NCBI]
CDS location
range 31327 -> 32550
strand +
CDS
GTGTTTTACGCGGTACCCGTCGGAACTCTTAACTATGATGAGCTTGTAAAAAATCATGGCAAGGCAACAATTACATTTATTGTCTCTGACGGACTGGCCCACTCAAAAAATATCCAGTCGTTTCCGTTTGCTAAAAATGCTAATGGGATTTTTGAGGCTAAGATAATTAACAATGGTACTGAGAGCGTGCCGGTTAATTATCGGATTAAGCTTTCAAAAGAGTCAGGGTATGTTGCCATTGCCAGCCAGTACGGCGGTATTCAGTACGGTCTGAAAGATGAAGCTGATGCAGTGCTTGAGACTAAGTCAGTTCTGCTGAATAACTCATTCTCATCTTGGACAGATGGAACGACATTTTATCAGGATCTGACTAAGAAGTCTGCAACGACAATGGCATCTAATGCTGACAACAAAGGGACATTAGGTATCTTGCCAACCTACACAAATACGACGAACTCTAACTTTTTTGGAGCCATCAAAGAACTAGCCCTATCTCAGACGGCCAAGGATTGGCGCATCTGGGCAAGAGCTCGCTTTGAGACAGGCCTAATGGGTCAGACAGGTCAGTGGACCCTTGCAGTTGTCGACACTAATAATCATGTTCTCGCAGCGATGTCAATTGACAAATTTGACAGAGCCGGAAACTCGGCCAAGATTAGCTTTATCGTAGGCGATAACTTGGGTAACATGAGAACAGTTAAGACAATTGATTTCACACCAAGCGCCTATCTGTCTCAAAACCCTTATGGGTATGAGGCGCTTGTTCAGGGTCGCAACCCGTTCGACATCATAAAAGAGGGAGATAAGATAACCTTCTTTTGGTACGGCACACACTATTCTTATGTAGAACCTAGCATCAAGGACTCTCAAGCTAAGTTAGTTCAATTTTTCGTTGGGCAACTTAATGGTCGCAACACGACAAACCAGTTAGTGACACATCATTACCTTATGGAATTTAGCTTCCATAAGCTGAACGTTAGCTCTTGGCGTGATGTCCCTAACCGCTATCCAAGTGGTTCAGAGCTTTTTATTGATAGCTCAGGCTTTATCAATCCCGATGAAAAAGGGCGATTATATGTCAACAACCTGATCACGAATGATGACGAAATTTTGGGCACTGAATTTTTTGAAGTGCCACCAGGCGAAACAACAGTTCAGTTGATAGTGTCTTCATTCGCTGAGGTTCTTGAGGCTAACGCGGAAATTGAGGAGGTATACATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf42d7fd5ea000867c7d878da031cefa428c997a610657e988fb628ae0ad3ef2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7643
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank