Protein

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Genbank accession
YP_009226732.1 [GenBank]
Protein name
tail fiber domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MSYFNNVYTLKLDIKQQNPNPVIRIVQYDSAVFKIELYDNGRKIDIKDGERFTVSVEHEATGETHSGIAKYDGEQFVVYDLRKADMKNIGTYRARFASYKDRNRVSSLMFRYEVYEDYETVGDASELTMLQELFQEVEEVGRVTQRQGEYAEDRGDYANAAGDYANRAGDSQIMKWLPYVKTLAERNKLYPNPENGDTVYVIDENKVFRYDGIDALDWEAISGYDTSVIQDIYNTKEDKTVVAKLREDLNSLTIGARNLLTGTDFEKPMNLKYTSPTFTFTQNKSDSSMTLAPTDKYVSTSAVYFDLEKEALENNFFTLSFNVKVLSGSATLKFKVGDAAYSEPVTVKASSNYQRVVLTASTQDLKTNKTNLLLQTTSAIAIEKESFKAEIGNRATTWTPSYLDVKTKLDDYGTRIKGLEVEMNTNVVKKSVYEADKSKNEEKLSKIIQDANSLTSIVSKKVDKGQVKSMINQTAERIKIKASNIDFDGVVVFKNRNNKIDPNAFVRINGGELTAKGYYRRVWRDGKARNRVQVVQLTDGMLRISDPKGDLVDSTKDRDYRYDIDVNGKKVYSTVRSLYYSSDGVSTYRDGSGKAFNKEGKVVSSGTIEFFSHEYSRSRGLTLYSAGGAIGLQAANNAIHIDAAATLYNRSRQANVIIRPHENVRKGINDFKFGISADNTGRLVYGDESKRLGVGLRFSKSSKNKVITGIDSTGRASSDVRLEIGEVRANKILSRDGKETVYFNNAGSGNLTQSATLRAGGIKTNATNFYVGVRGELRVTNTRGANFGKGIGYMPVRASKFNSVSSRKYKTNIKDLEINSLDVLNSTDIKQYNLKSDLNDGIDKVKYGVILEDSHDALKEGDAIDVYTMTSILWDVVKKQQKEIEQLKK
Physico‐chemical
properties
protein length:889 AA
molecular weight: 99718,62630 Da
isoelectric point:8,97937
aromaticity:0,09224
hydropathy:-0,58504

Domains

Domains [InterPro]
DC_1023
STR
7–886
DC_1023
IPR030392
CHP
805–889
IPR030392
IPR030392
CHP
805–860
IPR030392
YP_009226732.1
1 889
Architecture
STR
STR 7-889
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009226732.1
1 889
Domain Start End Length (AA) Confidence
N-terminal 1 266 266 0,9977
Central domain 267 508 243 0,2889
C-terminal 509 889 380 0,6660
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-266
Central
267-508
C-terminal
509-889

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SPbeta-like
[NCBI] 		1732063 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis 36-1
[NCBI] 		1248411 Bacillota > Bacilli > Caryophanales > Staphylococcaceae > Staphylococcus > Staphylococcus epidermidis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009226732.1 [NCBI]
Genbank nucleotide accession
NC_029119.1 [NCBI]
CDS location
range 64756 -> 67425
strand +
CDS
TTGTCATATTTTAATAATGTCTATACGTTAAAATTAGATATCAAGCAACAAAACCCTAACCCAGTAATTCGTATTGTTCAATATGACTCAGCTGTTTTTAAAATAGAGTTATATGATAATGGACGAAAAATAGATATCAAAGATGGCGAGAGATTTACGGTTAGTGTAGAACATGAGGCTACTGGTGAAACTCATTCTGGTATCGCTAAATACGATGGTGAACAATTTGTTGTTTATGATTTAAGAAAAGCTGATATGAAAAATATTGGTACATATAGAGCAAGATTTGCCTCTTATAAAGATAGAAACCGTGTTTCTTCACTAATGTTCAGATATGAAGTTTATGAAGATTATGAAACTGTTGGAGACGCTAGTGAATTAACTATGCTCCAAGAACTATTCCAAGAAGTTGAAGAAGTTGGAAGAGTTACACAACGTCAAGGTGAATATGCTGAGGATCGTGGAGATTATGCTAATGCAGCTGGTGACTATGCAAACCGTGCTGGAGACTCTCAGATTATGAAATGGCTACCTTACGTTAAGACCTTAGCTGAAAGAAATAAACTATATCCAAACCCGGAAAACGGCGATACTGTTTATGTTATTGATGAAAATAAAGTATTCAGGTATGACGGAATTGACGCATTAGACTGGGAAGCAATTTCTGGATATGACACTTCAGTTATTCAAGACATTTATAATACTAAAGAAGATAAAACAGTTGTTGCTAAATTAAGAGAAGATTTAAATTCATTAACTATTGGTGCTAGAAACTTACTCACAGGTACAGATTTCGAAAAACCTATGAATTTAAAATATACCTCACCTACCTTTACTTTCACTCAAAATAAATCAGACTCATCTATGACATTAGCCCCTACTGATAAATACGTTTCAACTTCTGCTGTATACTTTGATTTAGAAAAAGAAGCTCTCGAAAATAATTTCTTTACCCTTTCATTTAACGTAAAAGTATTAAGTGGTAGTGCTACACTCAAGTTTAAAGTTGGTGACGCTGCTTATTCTGAGCCTGTTACTGTAAAAGCTTCATCTAATTACCAACGTGTAGTATTAACTGCTTCAACTCAAGATTTAAAAACGAATAAAACTAACCTTTTATTGCAAACTACAAGTGCTATTGCCATTGAAAAAGAAAGCTTTAAAGCAGAAATCGGTAATAGAGCAACTACTTGGACACCTTCTTATCTAGATGTAAAAACAAAACTGGATGACTATGGTACTAGAATTAAAGGTTTAGAAGTTGAAATGAACACAAACGTAGTTAAGAAATCGGTCTATGAAGCTGATAAATCTAAAAATGAAGAGAAGCTCAGTAAGATTATACAAGACGCTAATAGTTTAACATCTATCGTTTCTAAGAAAGTTGATAAAGGTCAAGTTAAATCTATGATCAACCAAACTGCTGAACGTATCAAAATTAAAGCAAGTAATATTGATTTTGATGGAGTAGTTGTATTCAAAAACAGAAACAATAAGATTGATCCTAACGCTTTTGTAAGAATTAACGGTGGAGAATTAACTGCTAAAGGTTACTACCGAAGAGTATGGCGTGATGGTAAAGCTCGTAACCGTGTTCAAGTTGTTCAACTTACAGACGGAATGCTAAGAATTTCCGATCCAAAAGGTGACTTAGTTGACTCAACAAAAGATAGAGACTATCGCTATGATATTGATGTTAATGGTAAGAAAGTTTATAGTACAGTTCGTTCTCTTTACTATTCTTCAGATGGTGTCTCTACTTACCGTGACGGTTCTGGTAAAGCATTTAATAAAGAAGGTAAAGTAGTTTCTTCTGGTACTATCGAATTCTTCTCACATGAATATTCTAGAAGTCGTGGTTTAACATTATATTCTGCTGGTGGTGCAATTGGTTTACAAGCAGCTAACAATGCTATTCATATTGACGCAGCGGCTACTTTATATAATCGTTCAAGACAAGCTAATGTAATAATTCGACCTCATGAGAACGTTCGTAAAGGTATCAACGACTTCAAATTTGGTATTAGTGCTGATAATACAGGTAGACTTGTTTATGGTGATGAAAGTAAACGTTTAGGTGTAGGACTTAGATTTTCTAAATCATCTAAAAACAAAGTAATTACAGGTATTGACTCAACTGGACGTGCTAGTTCAGATGTACGTTTGGAAATTGGTGAAGTAAGAGCTAACAAAATTTTATCAAGAGATGGTAAGGAAACAGTTTACTTCAACAATGCTGGTAGTGGTAACTTAACTCAATCAGCTACTTTACGTGCTGGCGGTATCAAAACTAATGCAACTAACTTCTATGTTGGTGTACGTGGTGAACTACGTGTTACTAATACTAGAGGTGCTAACTTTGGTAAAGGTATTGGTTACATGCCTGTAAGAGCAAGTAAATTTAACTCTGTATCTAGTAGAAAATATAAAACAAATATTAAAGATTTAGAAATTAATTCTTTAGATGTTTTGAATTCTACTGATATTAAACAATACAATCTTAAATCTGATTTAAATGACGGTATCGACAAAGTTAAATATGGTGTGATCCTTGAAGACTCTCATGACGCTTTAAAAGAAGGAGACGCAATTGACGTTTATACTATGACTTCTATCCTTTGGGATGTTGTTAAAAAGCAACAAAAAGAAATCGAGCAATTGAAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
93b003e418e96dd96b13ab2f06741a9d106a87df6de84a1149864441e429eb9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6191
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of clinical isolates of Staphylococcus epidermidis Kornyenko,M.A., Ilyina,E.N., Manolov,A.I. and Kanygina,A.V. 2025-04-11 — GenBank