Protein

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Genbank accession
QBX28827.1 [GenBank]
Protein name
endopeptidase
RBP type
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MRTQDIALKPFVNGASVGAESALGIWKENLVGDDTFDVKSDILTLGSFNWEVDKIGNARGALGGVVGSILDVYGGEYEFDNRTIILHKQMGRKAPTVLEYGRNIVSVEEERLLDGNYTSIYPFVRYTPQPKPQEEASGKPHVSEHEQPEEQLVTLPEFILDGQYLELYAQRRIQMVDLSSHFNDDKNKKEPTVEEIRKLAQKYLKDNNVGAPKVSIEVDYIDLSQTLDYQDFKVMEEVELCDIVPLYYPKFGITTETEKVVEIVYDVYTDSNHTIKLGTIGQSISKSLTGGVSERINALENNQKVIVNNQKQFELNLPKYLLDINGNRVWYEKPDDNIEHKIGDYWFEKNGKYQRTWIWDGKQWVKVLDTEDLNFAQRAYDAAIAEFEKAKKAQEEINQRNQKELDEFRATLKNLALPEEAIKKITDAIKVDDIPSIKQSFDDLKNKVSETSETSRLNAEIIGTDGKTRYNKNLLVGDPNRVKKIDEDFIEVEANDGGFKRGETYTISFSQTCELLQKVAVTLTQANNKGVKLVLTPTKAKMEPQTFNLIKDKEVISVYPLSYTGILTGDWYKSKQIDLNASEVQELALEMDYKDVVDGKDATITGAWSDSPQIILDGGKK
Physico‐chemical
properties
protein length:621 AA
molecular weight: 70468,47000 Da
isoelectric point:4,90114
aromaticity:0,08696
hydropathy:-0,56957

Domains

Domains [InterPro]
DC_1571
ATT
11–280
DC_1571 Coil
IPR007119
Unmapped
35–278
IPR007119
IPR010572
ENZ
66–289
IPR010572
DC_1613
STR
219–603
DC_1613
QBX28827.1
1 621
Architecture
ATT
STR
ATT 11-280 | STR 281-603 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan470
[NCBI] 		2548189 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pyogenes
[NCBI] 		1314 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX28827.1 [NCBI]
Genbank nucleotide accession
MK448951 [NCBI]
CDS location
range 30030 -> 31895
strand +
CDS
ATGCGCACACAAGATATTGCTTTAAAGCCATTTGTAAACGGTGCGAGCGTAGGCGCTGAATCAGCTCTAGGAATCTGGAAGGAAAACCTTGTTGGTGATGACACTTTTGATGTCAAAAGCGACATCCTAACGCTTGGTAGTTTTAATTGGGAAGTGGATAAAATTGGCAATGCCAGAGGTGCTCTAGGAGGTGTTGTTGGCTCAATCTTGGATGTTTATGGTGGTGAGTATGAATTTGACAATCGCACTATCATCTTACACAAACAAATGGGTCGTAAAGCTCCTACTGTGTTGGAGTATGGCCGCAATATCGTCAGCGTAGAGGAGGAGCGATTGCTTGATGGCAATTACACCTCTATTTATCCATTTGTTAGATACACGCCCCAGCCCAAACCGCAAGAGGAAGCCTCTGGTAAGCCTCACGTAAGCGAGCATGAGCAACCCGAAGAACAACTGGTGACACTACCCGAGTTTATCCTAGATGGTCAGTATCTTGAGTTATATGCCCAGCGCAGAATCCAAATGGTTGATTTATCAAGTCATTTTAACGATGACAAAAATAAAAAAGAGCCAACAGTCGAAGAAATTAGAAAGCTAGCTCAGAAGTACCTTAAGGATAATAACGTAGGTGCCCCTAAAGTCAGCATTGAGGTTGATTATATCGACCTGTCACAAACACTTGACTACCAAGATTTTAAGGTCATGGAAGAGGTCGAGCTTTGCGATATTGTGCCTCTTTACTATCCAAAATTTGGCATCACAACCGAGACCGAAAAAGTAGTGGAGATTGTCTATGACGTCTATACAGATAGCAATCACACGATCAAGCTTGGGACAATCGGGCAGTCCATCTCGAAAAGTTTGACTGGCGGTGTGTCCGAACGTATTAATGCGCTGGAAAACAACCAAAAAGTGATTGTTAATAACCAGAAGCAATTTGAGCTTAACTTGCCTAAATATCTCCTAGACATCAATGGTAACCGTGTCTGGTACGAAAAACCAGATGACAATATTGAGCACAAGATAGGTGATTACTGGTTCGAAAAAAATGGTAAGTATCAGCGCACTTGGATTTGGGATGGCAAGCAATGGGTTAAAGTACTAGATACTGAGGATTTGAATTTTGCTCAAAGGGCCTATGATGCCGCAATAGCCGAATTCGAAAAAGCCAAAAAAGCGCAGGAAGAAATCAATCAACGCAACCAAAAAGAACTCGATGAATTCCGAGCCACCCTCAAAAACCTAGCGTTACCAGAGGAAGCCATCAAAAAAATCACAGATGCTATCAAGGTCGATGACATCCCATCAATTAAACAAAGCTTTGATGACCTCAAAAACAAAGTCAGCGAGACGAGCGAGACATCCCGTCTAAACGCCGAAATCATAGGCACAGACGGTAAGACCCGCTACAACAAAAACCTCTTGGTTGGCGATCCTAATCGTGTTAAAAAAATTGATGAGGATTTTATCGAGGTCGAAGCCAATGACGGTGGTTTTAAACGTGGTGAGACATACACGATAAGCTTTAGTCAGACTTGTGAGCTGCTCCAAAAAGTGGCTGTCACGCTGACACAGGCTAACAACAAGGGAGTTAAGTTAGTACTGACACCAACTAAAGCAAAAATGGAGCCGCAGACCTTTAATCTAATCAAGGATAAAGAAGTTATCAGCGTTTATCCTTTGAGCTATACAGGCATTTTAACAGGTGATTGGTATAAATCTAAGCAGATAGATTTAAACGCGTCGGAGGTGCAGGAATTGGCTCTGGAGATGGATTATAAAGATGTTGTTGACGGCAAGGATGCCACAATAACAGGGGCATGGTCAGACAGTCCACAAATAATTTTAGATGGAGGTAAAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8b48ab583d86f63f6c543d1bbbe49aade75f4f607ea40f4d452fef1438bd75df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6477
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank