Protein

View in Explore
Genbank accession
AOO00886.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRSGKIIWSIATSVVGILTTGATAQAVPVVPNFTQGSMTSHTETTSKVTETINSMDYNTGYSYSVTGSGISASGNLTPGTGSNNVTIDGVTSSWTGINNRPTFTQTTPGAAFQFTETYQGPGLSQQTIIQRVTEVTSVTDTTSIFQQ
Physico‐chemical
properties
protein length:148 AA
molecular weight: 15501,85360 Da
isoelectric point:5,04585
aromaticity:0,07432
hydropathy:-0,18311

Domains

Domains [InterPro]
IPR046285
STR
19–148
IPR046285
IPR046285
STR
30–148
IPR046285
AOO00886.1
1 148
Architecture
STR
STR 19-148
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2
[NCBI] 		687800 Uroviricota > Caudoviricetes > Pantevenvirales > Nerrivikvirus > Nerrivikvirus srim2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO00886.1 [NCBI]
Genbank nucleotide accession
KX349241.1 [NCBI]
CDS location
range 136706 -> 137152
strand -
CDS
ATGACCCGTTCTGGAAAGATAATCTGGTCTATTGCGACGAGTGTGGTGGGAATCCTGACTACAGGTGCCACCGCCCAGGCAGTCCCCGTTGTCCCAAACTTCACACAGGGCTCGATGACGAGCCACACAGAGACAACGAGCAAAGTGACAGAGACTATTAATAGTATGGATTATAACACTGGATATTCATATTCAGTGACTGGGAGTGGTATATCAGCATCAGGTAATCTAACACCTGGTACAGGATCAAATAATGTAACTATCGACGGTGTGACCTCATCATGGACAGGAATCAACAACAGACCAACATTCACACAGACGACACCAGGAGCAGCGTTTCAGTTCACCGAGACGTACCAAGGTCCTGGTTTAAGTCAACAAACGATTATCCAAAGGGTGACCGAGGTAACAAGTGTAACCGACACTACAAGTATCTTCCAGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3bc128f25bba657220c06e88ce6d10c512a249340d15bd975b54f23b52df34b9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8251
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50