Protein

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Genbank accession
CBW38039.1 [GenBank]
Protein name
maturation/adhesion protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MTRNVEELFGGVVTAPHQIPFTYKSSVGGETFISLPFYPVTGVVTINGGMQVPLDNFEIDGNTLNLGRALSKDDVVYCLFDKILSPEDTSKGIRIYKFQAVGGETEFTPDFTSYGVQSLYIGGEYKTPDIEYSYNSTTGKVSLQTALTAGVWVVAEMSVKQPNISPAFDRSIQEIARSANVKDSEVIVSTDTISLLDDKKVVYDSAAQIIYGLPIIPDGSVISSVSDGKLTYNPGDVQVDLIPVPTSAGALEIKLASEIGANGVGVGDTTVGEILKQDIFVIGITGQSNAAGSNNGGPNPASDKVVVWNGSNNTWGSSDYTQPPFSMSTPTGNNGNNNVALAFAHRLVDEHKAKKVYIIYDAVGGRSITDWMGDGVNSVRYASFKTKVESALTTPELVAAGKTKLDFLIWFQGEEDALTDNVTTYRDKFRTLDLQFRAESWMTSVTPMFVMGMSGLHTRYQVWQAQLNYCENYNRNCIYVNSAGLKTQYDIDQTGDYTHFLGQSLWEHGYDRIWNALNSKGSTHRSHLTPFYARGAGPWKGESDAIALFSSLISIDSATNNFPLNGPAAQGSISWGLNCSADGNYTMAGGHTVATDNTCNYSIGWGREITFGPGCAYSASFGYRHTLNQWGQFAAGVGHNLSSSYECALGRYSLYTTEQANKVIFQFGIGLTKRRKNAVTIREDGAIEMSVKSAHDPAQNGEMVIYAESNTSLRIKVRGTDGVVRSAVLPLS
Physico‐chemical
properties
protein length:732 AA
molecular weight: 79342,69470 Da
isoelectric point:5,24149
aromaticity:0,10109
hydropathy:-0,21694

Domains

Domains [InterPro]
DC_0116
ATT
1–92
DC_0116 G3DSA:3.30.2020.50 SSF52266 IPR011049
G3DSA:3.30.2020.50
ATT
160–245
G3DSA:3.30.2020.50 IPR005181 DC_0394
IPR052940
Unmapped
277–490
IPR052940
IPR036514
STR
279–529
IPR036514
SSF52266
STR
284–531
SSF52266
CBW38039.1
1 732
Architecture
ATT
ATT
STR
RBD
STR
RBD
ATT 1-92 | ATT 156-245 | STR 275-531 | RBD 532-568 | STR 569-661 | RBD 662-732
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CBW38039.1
1 732
Domain Start End Length (AA) Confidence
N-terminal 1 404 404 0,6733
Central domain 405 635 232 0,7730
C-terminal 636 732 96 0,9552
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-404
Central
405-635
C-terminal
636-732

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Vi01
[NCBI] 		2991283 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CBW38039.1 [NCBI]
Genbank nucleotide accession
FQ312032.1 [NCBI]
CDS location
range 121816 -> 124014
strand -
CDS
ATGACCAGAAATGTAGAAGAATTATTCGGCGGCGTAGTCACAGCTCCCCACCAGATTCCTTTCACTTATAAATCAAGTGTCGGTGGAGAAACTTTCATTTCTCTACCTTTCTATCCTGTCACTGGTGTTGTCACAATTAACGGCGGCATGCAAGTTCCGTTAGACAACTTCGAGATAGACGGGAATACGTTAAACCTCGGGCGCGCATTGTCTAAAGATGACGTGGTTTATTGCCTGTTCGACAAAATCCTTTCACCAGAAGATACTTCTAAAGGCATTCGAATATACAAATTTCAAGCCGTGGGTGGAGAAACTGAATTCACGCCTGACTTTACTTCTTATGGTGTCCAGTCTCTTTATATCGGTGGCGAGTACAAAACTCCTGATATAGAATATTCATACAACAGTACGACTGGGAAAGTTTCCCTACAAACTGCGCTGACTGCAGGGGTGTGGGTTGTTGCGGAGATGTCTGTTAAACAACCGAATATCAGTCCGGCGTTCGATCGCAGTATCCAAGAAATTGCCCGTTCGGCTAACGTAAAAGACTCTGAAGTCATTGTCAGCACTGATACCATATCTTTACTCGACGACAAGAAAGTTGTTTATGATTCAGCGGCGCAGATTATTTATGGTTTACCAATTATTCCTGATGGTTCAGTGATTTCTTCTGTATCTGATGGAAAATTGACTTATAATCCAGGTGATGTGCAGGTTGATTTGATACCTGTTCCGACATCTGCCGGTGCATTGGAAATTAAATTGGCCTCCGAGATTGGGGCGAATGGGGTGGGTGTCGGCGACACTACCGTCGGTGAGATTTTAAAACAAGATATCTTCGTTATTGGTATCACTGGACAGTCGAATGCTGCTGGTAGCAACAACGGTGGACCCAATCCCGCCAGCGATAAAGTTGTTGTATGGAATGGTTCTAACAATACTTGGGGCAGCAGCGACTATACACAACCCCCGTTCTCTATGAGTACTCCAACTGGCAACAACGGAAATAACAACGTTGCTCTGGCTTTTGCCCATCGCCTCGTTGATGAGCATAAGGCTAAGAAAGTTTATATTATCTATGATGCTGTAGGTGGCCGATCAATCACGGATTGGATGGGTGATGGTGTCAACTCTGTTCGATATGCATCGTTCAAAACCAAAGTAGAATCTGCTCTTACCACACCTGAGTTAGTTGCGGCAGGTAAAACTAAACTTGATTTTCTTATCTGGTTTCAGGGTGAGGAAGATGCGCTCACCGATAATGTAACAACTTACCGTGATAAATTCCGTACATTAGACTTACAATTCCGCGCAGAATCTTGGATGACTTCTGTAACACCAATGTTTGTTATGGGTATGTCTGGTTTACACACTCGTTATCAGGTATGGCAAGCCCAACTGAACTACTGTGAAAACTACAATCGTAATTGTATCTACGTCAACTCTGCTGGCCTCAAGACACAATACGATATTGACCAGACTGGTGATTACACGCATTTCCTCGGTCAGTCCCTTTGGGAACACGGTTATGATCGTATTTGGAATGCCCTTAATAGCAAGGGTTCTACACATCGGAGCCACTTGACACCATTCTATGCTCGTGGTGCTGGTCCGTGGAAAGGTGAGTCGGATGCCATTGCCCTGTTCAGTTCTCTGATTAGCATTGATTCCGCCACCAACAACTTCCCATTAAACGGTCCAGCAGCGCAAGGATCGATTTCCTGGGGGTTAAACTGTTCGGCGGATGGAAACTACACAATGGCTGGAGGACATACGGTAGCGACGGATAACACATGCAACTACAGCATTGGTTGGGGGCGTGAAATCACATTTGGCCCTGGGTGCGCATACAGTGCATCATTTGGTTATCGCCATACATTAAATCAGTGGGGACAGTTTGCAGCAGGTGTCGGGCATAATCTTTCATCCAGTTATGAATGTGCTTTGGGGCGTTATTCCCTCTATACTACCGAGCAAGCCAACAAAGTCATTTTCCAGTTTGGTATTGGCTTGACTAAACGTCGGAAGAACGCTGTTACTATTCGTGAAGACGGTGCGATTGAGATGTCTGTTAAGTCAGCGCATGATCCGGCTCAGAATGGTGAGATGGTTATTTATGCAGAGTCCAATACATCGTTGCGCATTAAAGTGCGAGGCACTGACGGTGTAGTACGCTCTGCTGTCTTGCCTTTATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b232fd45aac32a860cd9043de31470a713280c5ea2e11757bcce9e03e35fe2cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6929
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50