Protein

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Genbank accession
AUG88486.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAFQHKRVVQNGVTLIPSNYREGEIVLDFIRKRVVSKDASGLMVDFIGTDNVSFPEAPADNKLYARKDESWQEFNEFIDAPSDSSKYARVDGNWESVNEFPEAPTDNKKYGRTNNSWSEISEFQDAPSDGNKYTRKDGQWEVSDPVITSHSELSGLSDTNSHPASSISTSSGSDVEQELSTKATMEDLTESQNDIVGGSIFKGSNGEHVQNGDVIPAGTTRLRVLINGEPILLFAWDNLTLPATVTSVPTTDNGFAGYDVATDQGTFEFVTENKRNLRESNDILGWFSGDEFDGSTDITSNILAAKAYIEITNSRDIICSKGNAFINGVIELDNNVNVSFGDNKVISGPSMQWIVRKGSNVSINDIRMGEDGLTQNLQPLFLINSEAGPIFLDGQRDTSIKCGIKSEITTGAPFVRLEAKVKSGQTGSSAVTGVDVDVKTNQGRRAVEINADNLADTLKSAFVNSCRVSLKASATIDGIYEIYNSDESILTKPVNCEIAQNNYFIEYQATSGRAQVPLNSLGDRHVIDGQIWDLNIASNLSNVRVRGDACNILSSSFPTEESGRLVVGDGITPNTLGGLGGTQRSRSYSHIAQRTHCKYLGTGRTTNDLINATYAFLVSATDAIISGTDYSDGTIINSKTFPPSQFILNGDISVDYKMIGKPTVGDKFGLGIRINGTTYSTLRVSGLASDGFIAYLTLYMSVNDNRVDIAYKVGGNEKILVSQSVPDLSVNGATIEVYGFSHEGSEPSNRVTIAGLDGLIKYKTA
Physico‐chemical
properties
protein length:765 AA
molecular weight: 82832,74090 Da
isoelectric point:4,76120
aromaticity:0,07712
hydropathy:-0,33320

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
43–79
G3DSA:1.20.5.320 G3DSA:6.20.230.10 G3DSA:6.20.230.10 DC_2319
G3DSA:6.20.230.10
ATT
123–145
G3DSA:6.20.230.10
AUG88486.1
1 765
Architecture
STR
ATT
STR
STR 43-79 | ATT 99-145 | STR 146-290 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUG88486.1
1 765
Domain Start End Length (AA) Confidence
N-terminal 1 299 299 0,9959
Central domain 300 552 254 0,9193
C-terminal 553 765 212 0,9450
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-299
Central
300-552
C-terminal
553-765

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Vp_R1
[NCBI] 		2059867 Uroviricota > Caudoviricetes > Grimontviridae > Dalianvirus R1 >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
cde8d722244087c874955c5c08b134c439e15c4e50ccb5595b692635d4d8ede9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5565
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50