Protein

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Genbank accession
CAB5227918.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSQQPDPYTKGFNFSFVEQNTPTVPLPGTQVDNELNKISASILQTQSRLAEIQRDDGKINPLAIDPSGLIPGPAGPAGPTGLKGDTGERGLPGAKGETGNRGAQGERGLQGVQGMIGVTGAQGQQGSVGLTGAPGAIGPRGPQGSTGAKGDRGDQGIQGIQGIQGIQGVQGIPGNNGVGLDGSAVVVPINIADPNNANNHTVITPTSLDMYLDGIGNVLELATWGLGVADYNGGSQNNVTEVTPFEVFVKYNNIGTTMNKDGITFPDGSSVSSANNLQGPQGNPGPQGTQGPQGDQGPQGPQGNDGPQGSQGPQGPAGNDGGSGIGDAPSDGSAYVRQNNSWQPFSYFDQNSGGGGGIGDAPYNGTPYVRINNDWQPLSYYDQTGGGGGGGWSYDFNTIVSSLTNGATSTINGSQPNSGQILRYESGYIVWSNENTSGGGGQGPQGEQGPQGPQGNDGPMGGSFSDAPYDNNPYIRRNSNWEQPFRDFTPYNASGDPFYPYEVKITVNGSDYWMPIRPA
Physico‐chemical
properties
protein length:519 AA
molecular weight: 53296,81860 Da
isoelectric point:4,23890
aromaticity:0,07514
hydropathy:-0,70366

Domains

Domains [InterPro]
DC_0862
STR
1–70
DC_0862 IPR008160 DC_2298 G3DSA:6.20.230.10 G3DSA:1.20.5.320
IPR050149
Unmapped
71–461
IPR050149
IPR008160
STR
72–129
IPR008160 IPR008160 G3DSA:6.20.230.10
DC_0656
STR
116–257
DC_0656 G3DSA:1.20.5.320
CAB5227918.1
1 519
Architecture
STR
ATT
STR
STR 1-344 | ATT 345-380 | STR 439-483 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5227918.1 [NCBI]
Genbank nucleotide accession
LR798379 [NCBI]
CDS location
range 5349 -> 6908
strand +
CDS
ATGTCGCAGCAGCCTGATCCGTACACCAAGGGGTTTAACTTTTCTTTCGTTGAACAGAACACTCCCACGGTTCCGCTGCCTGGCACACAGGTTGATAACGAGCTGAACAAAATCTCGGCATCCATTCTGCAAACGCAGTCGCGCCTCGCAGAGATCCAGCGCGATGACGGTAAGATCAACCCTCTGGCGATAGATCCATCTGGCCTCATACCCGGCCCTGCGGGCCCTGCTGGGCCTACAGGTTTGAAAGGCGATACAGGCGAACGCGGTTTGCCTGGAGCAAAAGGCGAGACAGGTAATCGCGGCGCGCAAGGCGAGCGCGGTTTGCAGGGCGTTCAAGGAATGATCGGAGTCACGGGAGCTCAAGGTCAGCAAGGAAGTGTCGGCCTCACAGGAGCGCCTGGAGCAATCGGCCCGCGAGGGCCTCAGGGATCCACGGGAGCAAAAGGAGATCGAGGCGATCAAGGCATCCAGGGGATCCAAGGGATCCAAGGGATCCAGGGCGTCCAGGGAATTCCAGGAAATAACGGCGTTGGTCTTGATGGATCTGCTGTCGTTGTGCCGATCAACATAGCTGATCCAAACAACGCAAATAACCATACGGTAATCACGCCCACCAGCCTGGACATGTATCTCGATGGTATCGGTAATGTTCTTGAGCTCGCAACATGGGGGCTTGGCGTTGCTGATTACAACGGAGGAAGCCAAAACAATGTAACCGAGGTTACCCCTTTTGAAGTTTTCGTTAAGTACAACAACATCGGAACAACGATGAACAAGGATGGTATCACTTTTCCGGACGGAAGCTCTGTTAGCTCTGCAAATAATCTTCAAGGACCGCAAGGCAACCCAGGTCCACAAGGTACGCAAGGTCCGCAAGGCGATCAAGGTCCGCAAGGTCCGCAAGGCAACGATGGTCCGCAAGGTAGCCAAGGACCACAGGGGCCAGCGGGTAATGATGGAGGCAGCGGCATTGGTGATGCACCGTCTGACGGAAGTGCGTATGTTCGTCAGAATAATTCTTGGCAACCCTTCTCATACTTTGACCAGAACAGCGGTGGTGGTGGAGGCATTGGAGATGCACCTTACAACGGCACCCCTTATGTCCGCATCAACAACGATTGGCAGCCATTGTCGTACTACGATCAGACGGGCGGCGGTGGCGGTGGTGGTTGGAGTTATGACTTCAATACAATCGTTTCAAGTCTGACCAATGGTGCGACATCTACTATCAATGGAAGTCAGCCAAACTCTGGACAGATTTTGAGGTATGAGTCGGGATATATTGTTTGGAGTAACGAAAATACTTCTGGCGGTGGCGGTCAAGGACCACAGGGCGAGCAAGGACCGCAAGGACCGCAGGGGAATGACGGCCCAATGGGCGGTAGTTTTTCTGACGCTCCCTACGACAATAACCCCTATATTCGCCGCAATAGTAATTGGGAACAGCCATTCAGGGATTTCACTCCTTACAACGCCAGCGGCGATCCATTCTACCCATACGAGGTTAAGATTACCGTCAACGGCTCCGACTATTGGATGCCAATCCGACCAGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f61834ceadf40224b0cdf9dce50ff2b5ee072540e3b61c931edf50cb7feb765
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6313
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50