Protein

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Genbank accession
XYH44933.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSISLIGLTSSPAFFITDMTRNAKTLVGIPIKSVRMQFTSRLLTNRGERGEIIIDGRVIEPSEIVVTTFCTSITELEEVNRLLRNVESIFQITSRGLEFPGYMVQSNQQEQSAEHLSTSPVEIRFKRVMVPAKELPICAQAGDAATTFGGIVNAYKQDAVKSLEKIQNTLSFGE
Physico‐chemical
properties
protein length:174 AA
molecular weight: 19243,89640 Da
isoelectric point:5,95084
aromaticity:0,06322
hydropathy:-0,03333

Domains

Domains [InterPro]
DC_1370
STR
1–172
DC_1370
IPR054442
ATT
54–134
IPR054442
XYH44933.1
1 174
Architecture
STR
ATT
STR
STR 1-53 | ATT 54-134 | STR 135-172 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF39
[NCBI] 		3446107 No lineage information
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH44933.1 [NCBI]
Genbank nucleotide accession
PV834959.1 [NCBI]
CDS location
range 8777 -> 9301
strand -
CDS
ATGTCTATTTCACTTATTGGCTTAACTTCTTCTCCTGCATTTTTTATCACAGACATGACAAGAAACGCTAAAACTCTTGTCGGAATACCGATTAAATCTGTAAGAATGCAGTTCACATCTAGGCTTCTCACGAATAGAGGAGAGAGAGGAGAGATCATTATCGACGGAAGGGTGATCGAACCTTCCGAGATTGTTGTTACCACTTTTTGTACCAGCATAACCGAACTGGAAGAGGTAAACAGGCTACTCCGAAACGTCGAGTCTATATTCCAGATCACCAGCAGGGGATTAGAATTTCCCGGATATATGGTTCAAAGCAACCAGCAAGAACAATCCGCCGAACATCTATCGACTTCACCTGTAGAGATAAGGTTTAAAAGGGTTATGGTTCCCGCTAAAGAGTTACCTATCTGCGCACAAGCCGGAGACGCCGCGACAACGTTCGGCGGCATCGTCAACGCATACAAGCAAGATGCGGTAAAGTCTTTAGAGAAGATCCAAAACACTTTGTCTTTCGGAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f3f3e7593867bcc780a44ce2c3add05057b1e7777c636dc0856a4381c798728
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7150
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50