Protein

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Genbank accession
YP_009042434.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MDINFQDAAVGSTQIADRSGRIWTRNGSGAGAAVVNDPDHGNVLFLDGKTWYRTDLTPDMYLNTTNWKMTVEFKPANTTYSKLFSTGDYPSPAGLALSLNQYPATYIQAFLEQSGTNFQRLMTNLTNSRVWEKVVITREVGKPFTMTVYRNGVQVAATTLANFSFGNGSSSSGIVLGTTAGAPGAQMASVYLKSLKIERLP
Physico‐chemical
properties
protein length:201 AA
molecular weight: 21840,34010 Da
isoelectric point:9,15369
aromaticity:0,10448
hydropathy:-0,22189

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
4–197
G3DSA:2.60.120.200
IPR013320
STR
26–179
IPR013320
YP_009042434.1
1 201
Architecture
STR
STR 4-197 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage CR8
[NCBI] 		1327934 Uroviricota > Caudoviricetes > Vequintavirinae > Certrevirus CR8 >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009042434.1 [NCBI]
Genbank nucleotide accession
NC_024354 [NCBI]
CDS location
range 107192 -> 107797
strand -
CDS
ATGGACATTAATTTCCAAGATGCCGCTGTTGGATCTACCCAAATTGCAGACCGATCTGGCAGAATTTGGACAAGGAACGGCTCCGGGGCCGGGGCTGCTGTAGTAAACGACCCGGATCATGGGAATGTGCTGTTTTTGGACGGGAAGACTTGGTACAGGACCGATCTGACCCCAGACATGTACCTGAACACGACAAACTGGAAGATGACTGTGGAGTTCAAACCAGCGAACACCACCTATTCCAAGCTGTTCAGTACAGGTGACTACCCATCCCCTGCTGGGCTGGCACTGTCACTTAATCAGTACCCTGCGACATACATCCAGGCATTTTTGGAGCAATCGGGGACTAATTTCCAGCGCTTAATGACCAACCTGACAAACTCACGGGTGTGGGAAAAGGTTGTCATAACAAGAGAGGTCGGAAAGCCCTTCACGATGACCGTCTATCGGAACGGTGTTCAGGTGGCTGCTACAACACTGGCAAACTTCAGCTTTGGGAACGGAAGCTCGTCGTCAGGCATAGTATTGGGGACAACAGCCGGAGCACCAGGTGCCCAAATGGCATCTGTGTATCTGAAATCTCTGAAAATAGAGAGGCTACCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f98437403c9afeac6091e9730a600b7e0ba6ad7de60c6a611de86c03d718c532
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8329
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Cronobacter sakazakii Bacteriophage CR8 Kim,Y., Shin,H. and Ryu,S. 2012-06 — GenBank