Protein

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Genbank accession
YP_009808031.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MALSVQRATSDGTMTNIVLSIEFFDTRDIFVTLDETPAIEGTDYTWQGRTQINFTNAPLADGVEVTLTRRTNRTALRHIFSEGAEFTRANLDDAHTQLLYLSQEMTEGSGISDFYGDLDMHRYRVRNMAQGTENRDAVTFLQLKEVADRVTAIENIKGTNRRGPITISTKSPDTVPVQYEEWVMIGDVDNGAFVNSTNDKDQE
Physico‐chemical
properties
protein length:203 AA
molecular weight: 22823,97510 Da
isoelectric point:4,61416
aromaticity:0,07882
hydropathy:-0,49852

Domains

Domains [InterPro]
DC_1609
STR
1–203
DC_1609
IPR005604
ATT
4–108
IPR005604
YP_009808031.1
1 203
Architecture
ATT
STR
ATT 1-108 | STR 109-203
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP_KF1
[NCBI] 		2041472 Uroviricota > Caudoviricetes > Autographivirales > Maculvirus > Maculvirus KF1
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009808031.1 [NCBI]
Genbank nucleotide accession
NC_048035.1 [NCBI]
CDS location
range 17846 -> 18457
strand +
CDS
ATGGCATTAAGTGTACAACGTGCTACGAGCGACGGTACTATGACCAACATCGTCCTCAGCATTGAATTCTTTGACACGCGTGACATTTTCGTTACGCTTGACGAGACACCTGCAATCGAGGGTACAGATTACACTTGGCAGGGTCGAACACAAATTAACTTTACTAATGCCCCGTTAGCTGATGGGGTAGAGGTTACGCTTACACGGCGTACTAACCGCACTGCGCTGCGTCATATCTTCTCTGAGGGTGCTGAGTTCACCCGAGCTAACTTAGACGACGCGCATACACAGTTGCTGTACCTAAGTCAAGAAATGACTGAGGGTTCTGGCATTAGCGATTTCTATGGTGACTTGGATATGCACCGTTACCGAGTGCGCAACATGGCACAAGGTACGGAGAACCGAGACGCTGTAACGTTCCTCCAATTGAAAGAGGTTGCAGACCGTGTAACCGCAATTGAGAACATTAAGGGTACGAACCGCCGAGGCCCAATCACTATCTCCACTAAATCCCCTGACACCGTTCCGGTTCAGTACGAGGAATGGGTGATGATTGGTGATGTGGACAATGGTGCGTTCGTTAACTCAACTAACGATAAAGACCAAGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c8c8d0cbd813e18dc9ba6553cf4b71294c88f799a53441e52b9924bef03c4a65
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8123
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_VpaP_KF1 Yu,J., Kwak,S.-J., Lim,J.-A. and Chang,H.-J. 2005-02 — GenBank