Protein

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Genbank accession
APD22448.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MATKEATGRLNLFDDPSPLPKTKNINILVEGIRKKTRGADVRESIAKALEVTYETASKDGNANMEVAKARGGFDTLSQNLLSINANADAANQKASQLINDKVDKNGTAQVTWSMLAQDAREHISGNKVAVVGNNAVSSANIVNGSVTDAKLDERMGFGLMLAGRLTIDAKNSTVTLASGSWFQVGKRKASVNENLSASLPKETVSQYVIYNDETHELYVRNLRNISNIGNRETILAILYNGVLVHPQSSPFVKTIGLKIGERSDYIDANWGTLIQGKIIFDPKSRTIRGQREGNDFIISFDGYFINGIDEFELTFDSPFGRLLLFDRDSKTFQLTTMYSYSQYQKTEVPKTATLIKVAEIYFNEIRHISHERNFVNTNKPISSKKTISLEQIKIDLQTKRTIIVTLGDSTTDGFRTTGYSGNVLERLSDKPKSYTEILNNIINSQKGYSFNHKFYNRGFSGKTINWLRQNLDAVLSPISEKIDYVFIAMGINDMVYNENTLKSFKEDHIEIANSLILKGIKPVFMSTQAEFENHKRFGSKINAIADNVKKDLAAELGIPFIDYNEGTRNILNNSEYKIKELIPDMCHFGDLGHQKGAEFLASQLIHQTAVISESRKVGYQNNKVVSDLNYSDYLTDDQDEVKFIERTDGFDLEGQLNSAQTKKMFEVSVYIERPSIIRFFGDNVIVTSNGQSLSDGTVLDVGFYRITAKNRSGIASKFRGLKFNLKEV
Physico‐chemical
properties
protein length:728 AA
molecular weight: 81450,02070 Da
isoelectric point:8,38310
aromaticity:0,08791
hydropathy:-0,39148

Domains

Domains [InterPro]
DC_0719
STR
1–665
DC_0719
IPR036514
STR
401–616
IPR036514
cd00229
ENZ
403–603
cd00229
SSF52266
STR
403–605
SSF52266
IPR013830
ENZ
406–594
IPR013830
APD22448.1
1 728
Architecture
STR
STR 1-665 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APD22448.1
1 728
Domain Start End Length (AA) Confidence
N-terminal 1 385 385 0,9824
Central domain 386 584 200 0,4565
C-terminal 585 728 143 0,4369
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-385
Central
386-584
C-terminal
585-728

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage IPP24
[NCBI] 		1916164 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pneumoniae
[NCBI] 		1313 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD22448.1 [NCBI]
Genbank nucleotide accession
KY065465.1 [NCBI]
CDS location
range 30843 -> 33029
strand +
CDS
ATGGCAACAAAAGAAGCAACAGGACGTTTAAATTTGTTTGATGATCCATCACCGCTACCAAAGACTAAGAACATCAACATTTTAGTTGAAGGTATCAGAAAAAAAACGAGAGGTGCTGATGTTCGAGAATCTATCGCGAAAGCGCTTGAGGTAACATACGAAACAGCATCCAAAGATGGCAATGCAAATATGGAAGTGGCCAAAGCCAGAGGTGGATTTGACACACTTTCGCAAAATCTTTTGAGCATAAATGCTAATGCGGATGCTGCTAATCAAAAAGCTAGTCAACTTATCAATGACAAGGTTGATAAGAATGGTACTGCACAAGTTACTTGGTCAATGTTAGCACAGGATGCAAGAGAGCACATCTCTGGGAACAAAGTCGCAGTTGTTGGAAATAATGCTGTTAGCTCTGCTAATATTGTTAACGGGTCTGTAACAGATGCTAAATTAGACGAGCGTATGGGTTTTGGTTTAATGTTAGCAGGGCGATTAACAATTGATGCAAAAAATTCTACAGTTACATTAGCCAGCGGAAGTTGGTTTCAAGTAGGTAAAAGAAAAGCTAGCGTGAATGAGAATTTATCAGCATCTTTACCAAAAGAAACAGTAAGTCAATACGTTATATACAATGACGAAACTCATGAATTGTATGTGAGAAATCTTAGAAATATTAGCAATATTGGTAATAGAGAAACCATTCTTGCCATTTTGTACAACGGGGTGCTTGTGCATCCACAATCTTCTCCTTTCGTCAAGACTATTGGACTAAAGATAGGTGAGAGAAGTGACTATATAGATGCTAACTGGGGCACGTTAATTCAAGGTAAGATTATATTTGATCCAAAATCAAGAACGATAAGAGGTCAAAGAGAAGGTAATGACTTTATTATCTCTTTTGACGGATACTTTATCAATGGTATTGATGAGTTTGAACTCACGTTTGACTCTCCTTTTGGTCGATTGCTACTTTTTGATAGAGATAGCAAGACATTTCAACTTACAACAATGTACTCATATTCTCAATATCAAAAAACCGAAGTTCCAAAGACAGCAACGTTAATTAAAGTTGCAGAAATATATTTCAATGAAATCCGACATATTTCTCACGAAAGAAACTTTGTCAACACAAATAAGCCGATTTCGTCTAAAAAAACAATCAGTTTGGAACAGATCAAAATTGATCTTCAAACTAAAAGAACGATTATTGTAACTTTAGGTGATAGTACAACTGATGGATTCAGAACAACTGGATACTCAGGAAATGTTCTTGAAAGGCTGTCCGACAAACCTAAGAGTTATACTGAGATTTTAAATAATATTATAAATAGTCAAAAGGGTTATTCATTCAACCATAAATTCTACAATCGAGGATTCTCTGGAAAAACAATTAATTGGCTACGCCAAAATTTGGATGCTGTTCTGTCACCAATATCTGAAAAGATTGATTATGTTTTCATTGCTATGGGCATAAACGACATGGTTTATAACGAAAATACGTTGAAAAGTTTTAAAGAAGATCATATCGAGATTGCGAACAGCTTAATTTTAAAAGGAATAAAACCTGTTTTCATGAGTACTCAAGCGGAATTTGAGAATCATAAACGTTTTGGTTCAAAAATTAATGCTATAGCTGATAATGTAAAAAAAGATTTAGCGGCAGAATTAGGAATACCATTTATTGATTATAACGAAGGTACACGAAATATTTTGAATAATTCAGAATATAAGATTAAGGAATTAATTCCTGACATGTGTCATTTTGGAGATCTTGGACATCAAAAAGGGGCGGAATTCTTAGCTAGTCAATTGATACATCAGACAGCAGTGATTTCAGAATCTAGAAAAGTTGGATATCAAAACAACAAAGTTGTGTCAGATTTGAACTATTCGGATTACTTAACAGATGATCAGGATGAAGTCAAATTTATTGAAAGAACTGACGGTTTCGATTTAGAAGGTCAACTAAATTCCGCTCAAACAAAGAAAATGTTTGAGGTTTCGGTTTATATTGAACGTCCGTCAATTATCCGCTTTTTTGGAGACAACGTGATTGTGACGTCAAATGGGCAGTCATTATCAGACGGTACTGTGCTCGATGTCGGATTTTATCGAATTACAGCCAAGAATCGTTCTGGAATTGCTAGTAAATTCCGTGGCTTGAAATTTAATCTGAAAGAAGTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9bb386cbf8fa5817462e484317d196925c7fa53a63cfd9d3c9a7e2394c9a1d86
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6806
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50