Protein

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Genbank accession
QGH71328.1 [GenBank]
Protein name
tail fiber related protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSLLKDYKNFTISKQEIHPEIGLPILYHEDEEGRDWYELQSTFNADTIKIGYNADGVIVTASKDVWAIAPTGLSVTETWSLPDDFELGQFVISDGAIVRQMPDNSEIIDAARERKRQLIEEVSLEIDVLKDAEELGDLTEREAQRLAALKNYRVELMRVDISKEGEIWPIKPRSIL
Physico‐chemical
properties
protein length:176 AA
molecular weight: 20091,45230 Da
isoelectric point:4,52100
aromaticity:0,07386
hydropathy:-0,36705

Domains

Domains [InterPro]
DC_1477
STR
1–175
DC_1477
IPR003458
RBD
40–172
IPR003458
Coil
Unmapped
112–132
Coil
QGH71328.1
1 176
Architecture
STR
STR 1-175 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_Yen_X1
[NCBI] 		2663327 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGH71328.1 [NCBI]
Genbank nucleotide accession
MN617773.1 [NCBI]
CDS location
range 36029 -> 36559
strand -
CDS
ATGAGCTTACTCAAAGACTACAAGAACTTTACAATATCAAAACAGGAGATTCACCCTGAAATTGGGCTTCCAATTCTATATCATGAGGACGAGGAGGGGCGCGACTGGTACGAACTGCAAAGCACATTTAACGCAGACACTATAAAGATCGGCTATAACGCTGACGGCGTAATAGTGACGGCATCAAAGGATGTCTGGGCGATAGCCCCTACCGGCTTATCAGTAACGGAGACTTGGAGCTTGCCGGATGATTTCGAGCTTGGGCAGTTCGTGATCTCTGATGGTGCTATTGTGCGACAAATGCCTGATAATAGTGAGATAATAGACGCAGCAAGGGAAAGAAAACGCCAACTGATAGAGGAGGTTTCACTAGAAATCGACGTACTGAAAGATGCGGAGGAATTGGGTGATTTAACCGAAAGGGAAGCGCAGCGCCTAGCAGCATTAAAGAATTACCGTGTTGAGCTTATGCGGGTTGATATTTCGAAAGAGGGCGAGATATGGCCTATCAAACCAAGGAGCATATTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
482270293a00682e9a584a6221f23ae998a011648a742e983c54414af9d8c461
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8492
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage vB_Yen_X1 administered orally efficiently protects a murine chronic enteritis model against Yersinia enterocolitica infection Xue,Y. 2020-03-06 — GenBank